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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0611100-01
Os01t0848200-02
Os05t0455500-02

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 Os01t0848200-02 AT2G39800.1 21798944
AT2G39800.1 Os05t0455500-02 AT2G39800.1 21798944
AT2G39800.1 Os01t0611100-01 AT5G20010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G357200.1 Wheat cytosol 88.71 89.32
TraesCS3B01G395900.1 Wheat cytosol 88.71 89.32
KXG33696 Sorghum cytosol 87.21 87.93
TraesCS3A01G363700.2 Wheat endoplasmic reticulum, golgi, plasma membrane 86.39 83.12
Os05t0455500-02 Rice plasma membrane 77.55 79.61
HORVU3Hr1G085760.5 Barley cytosol, plastid 88.16 78.45
Zm00001d012391_P003 Maize cytosol, peroxisome, plasma membrane 78.1 76.03
VIT_13s0019g02360.t01 Wine grape cytosol 73.06 74.9
GSMUA_Achr10P... Banana cytosol 11.97 73.33
KRH73083 Soybean endoplasmic reticulum 70.61 72.79
KRH15055 Soybean nucleus 70.2 72.37
KRG97830 Soybean endoplasmic reticulum 70.07 72.03
PGSC0003DMT400068829 Potato cytosol 70.2 71.97
Solyc08g043170.2.1 Tomato plastid 70.34 71.81
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 69.8 71.55
PGSC0003DMT400068827 Potato cytosol 60.82 70.73
Bra005012.1-P Field mustard cytosol 68.57 70.29
CDX74830 Canola cytosol 68.57 70.29
CDY20482 Canola cytosol 68.44 70.15
AT2G39800.1 Thale cress cytosol 68.3 70.01
Bra000150.1-P Field mustard cytosol 67.89 69.79
CDY07635 Canola cytosol 67.89 69.79
CDX76082 Canola cytosol 67.89 69.69
CDY61781 Canola cytosol 67.76 69.65
CDY07034 Canola cytosol 67.76 69.46
CDX93233 Canola cytosol 67.76 69.46
Bra014732.1-P Field mustard cytosol 67.76 69.26
CDY41203 Canola cytosol 68.3 69.05
Bra007179.1-P Field mustard cytosol 68.3 69.05
CDY40241 Canola cytosol 68.3 69.05
Bra017051.1-P Field mustard cytosol 67.35 69.04
AT3G55610.1 Thale cress cytosol 67.62 68.46
CDY65768 Canola cytosol 67.35 68.18
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 24.22 59.73
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1EntrezGene:4324853EMBL:AK101230
InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinase
ProteinID:BAB64280.1ProteinID:BAF06716.1ProteinID:BAS75219.1ProteinID:EEE55670.1InterPro:G-glutamylP_reductase_CSGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004349GO:GO:0004350GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006561GO:GO:0008150
GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114GO:GO:0055129InterPro:GPR_dom
InterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163InterPro:IPR036393
HAMAP:MF_00412HAMAP:MF_00456EnsemblPlantsGene:Os01g0848200EnsemblPlants:Os01t0848200-02InterPro:P5_carboxy_synPFAM:PF00171
PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474ScanProsite:PS00902ScanProsite:PS01223PANTHER:PTHR11063
PANTHER:PTHR11063:SF13UniProt:Q941T1SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027
TIGRFAMs:TIGR01092UniParc:UPI000009EB6ERefSeq:XP_015622203.1SEG:seg::
Description
guanine nucleotide exchange factor for Rop 5, pyrroline-5-carboxylate synthetase 2, proline carboxylate synthase 2Similar to Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase)]. (Os01t0848200-01);Similar to Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase)]. (Os01t0848200-02)
Coordinates
chr1:+:36431034..36440843
Molecular Weight (calculated)
79513.0 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.058
Length
735 amino acids
Sequence
(BLAST)
001: MGRGGIGGAG LVAAVAKADV ENTDSTRGFV KDVKRIIIKV GTAVVTGPNG RLAMGRLGAL CEQVKQLNFE GYEVILVTSG AVGVGRQRLK YRKLVNSSFA
101: DLQNPQMDMD GKACAAVGQS VLMAIYDTLF SQLDVTSSQL LVTDRDFMDP SFGNQLRETV NSLLDLKVIP VFNENDAIST RRQPYEDSSG IFWDNDSLAR
201: LLAQELKADL LIMLSDVEGL YSGPPSDPQS KIIHTYVHEQ HGKLISFGEK SRVGRGGMQA KVAAAFTASS KGIPVVIASG FAIDSIIKVM RGEKIGTLFH
301: REANQWGCSK EATAREMAVA ARDCSRHLQK LSSEERKKIL LDIADALEAN EDLITSENQA DLDLAQDIGY DKSLVARMTI KPGKIKSLAG SIREIADMED
401: PISHTLKRTE VAKDLVFEKT YCPLGVLLII FESRPDALVQ IASLAIRSGN GLLLKGGKEA MRSNTILHKV ITGAIPDVVG KKLIGLVKNK DEIADLLKLD
501: DVIDLVIPRG SNKLVSQIKA ATKIPVLGHA DGICHVYIDK SADMDMAKRI VLDAKVDYPA ACNAMETLLV HKDLNRTEGL DDLLVELEKE GVVIYGGPVA
601: HDTLKLPKVD SFHHEYNSMA CTLEFVDDVQ SAIDHINRYG SAHTDCIITT DGKAAETFLQ QVDSAAVFHN ASTRFCDGAR FGLGAEVGIS TGRIHARGPV
701: GVDGLLTTRC ILRGSGQVVN GDKGVVYTHR ELPLQ
Best Arabidopsis Sequence Match ( AT3G55610.1 )
(BLAST)
001: MTEIDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA ICEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQMEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTVAQ MLVTDSSFRD KDFRKQLSET VKAMLRMRVI PVFNENDAIS TRRAPYKDST GIFWDNDSLA ALLSLELKAD LLILLSDVEG
201: LYTGPPSDST SKLIHTFIKE KHQDEITFGE KSKLGRGGMT AKVKAAVNAA YGGVPVIITS GYAAENISKV LRGLRVGTLF HQDAHLWAPV VDTTSRDMAV
301: AARESSRKLQ ALSSEDRKQI LHDIANALEV NEKTIKAEND LDVAAAQEAG YEESLVARLV MKPGKISSLA ASVRQLAEME DPIGRVLKKT QVADDLILEK
401: TSSPIGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NSTKIPVLGH ADGICHVYVD KSGKLDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNGF LDDLIYVLQT KGVTLYGGPR ASAKLNIPET KSFHHEYSSK
601: ACTVEIVEDV YGAIDHIHQH GSAHTDCIVT EDSEVAEIFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STSRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH KDLPVLQRTE AVENGI
Arabidopsis Description
P5CSBDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VF78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.