Factsheet for Zm00001d012391_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010056_P002
Zm00001d011328_P001
Zm00001d011474_P001
Zm00001d012391_P003
Zm00001d038358_P002
Zm00001d039090_P001
Zm00001d039091_P002
Zm00001d044054_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	Zm00001d010056_P002	AT2G39800.1	21798944
AT2G39800.1	Zm00001d012391_P003	AT2G39800.1	21798944
AT2G39800.1	Zm00001d038358_P002	AT2G39800.1	21798944
AT2G39800.1	Zm00001d011328_P001	AT5G20010.1	21798944
AT2G39800.1	Zm00001d011474_P001	AT5G20010.1	21798944
AT2G39800.1	Zm00001d039090_P001	AT5G20010.1	21798944
AT2G39800.1	Zm00001d039091_P002	AT5G20010.1	21798944
AT2G39800.1	Zm00001d044054_P002	AT5G20010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33696	Sorghum	cytosol	82.65	85.6
Os01t0848200-02	Rice	plasma membrane	76.03	78.1
TraesCS3D01G357200.1	Wheat	cytosol	74.97	77.53
TraesCS3B01G395900.1	Wheat	cytosol	74.97	77.53
TraesCS3A01G363700.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	73.64	72.77
GSMUA_Achr10P...	Banana	cytosol	11.39	71.67
HORVU3Hr1G085760.5	Barley	cytosol, plastid	75.36	68.89
VIT_13s0019g02360.t01	Wine grape	cytosol	63.44	66.81
PGSC0003DMT400068829	Potato	cytosol	63.05	66.39
KRH73083	Soybean	endoplasmic reticulum	62.65	66.34
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	62.78	66.11
KRH15055	Soybean	nucleus	62.25	65.92
Zm00001d038358_P002	Maize	cytosol	63.58	65.84
Zm00001d010056_P002	Maize	cytosol	66.75	65.62
Solyc08g043170.2.1	Tomato	plastid	62.52	65.56
KRG97830	Soybean	endoplasmic reticulum	61.99	65.45
PGSC0003DMT400068827	Potato	cytosol	54.57	65.19
Bra000150.1-P	Field mustard	cytosol	61.19	64.62
CDY07635	Canola	cytosol	61.19	64.62
CDY61781	Canola	cytosol	61.06	64.48
Bra005012.1-P	Field mustard	cytosol	61.19	64.44
CDY20482	Canola	cytosol	61.06	64.3
CDY07034	Canola	cytosol	61.06	64.3
CDX74830	Canola	cytosol	61.06	64.3
CDX93233	Canola	cytosol	60.93	64.16
AT2G39800.1	Thale cress	cytosol	60.79	64.02
Bra017051.1-P	Field mustard	cytosol	60.66	63.88
CDX76082	Canola	cytosol	60.26	63.55
Bra007179.1-P	Field mustard	cytosol	61.06	63.41
CDY40241	Canola	cytosol	61.06	63.41
CDY41203	Canola	cytosol	61.06	63.41
AT3G55610.1	Thale cress	cytosol	60.79	63.22
Bra014732.1-P	Field mustard	cytosol	60.13	63.14
CDY65768	Canola	cytosol	60.13	62.53
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	20.66	52.35
Zm00001d005299_P001	Maize	mitochondrion	15.76	31.82
Zm00001d019946_P001	Maize	mitochondrion	5.03	15.57

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	UniProt:A0A1D6G8E7	ProteinID:AQK99430.1
InterPro:AceGlu_kinase-like_sf	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Asp/Glu/Uridylate_kinase	InterPro:G-glutamylP_reductase_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004349	GO:GO:0004350	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006561
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016491	GO:GO:0016620	GO:GO:0016740	GO:GO:0055114	GO:GO:0055129
InterPro:GPR_dom	InterPro:Glu/AcGlu_kinase	InterPro:Glutamate_5-kinase_CS	InterPro:IPR016162	InterPro:IPR016163	InterPro:IPR036393
HAMAP:MF_00412	InterPro:P5_carboxy_syn	PFAM:PF00696	PIRSF:PIRSF036429	PRINTS:PR00474	ScanProsite:PS00902
ScanProsite:PS01223	PANTHER:PTHR11063	PANTHER:PTHR11063:SF13	SUPFAM:SSF53633	SUPFAM:SSF53720	UniParc:UPI00084429A5
EnsemblPlantsGene:Zm00001d012391	EnsemblPlants:Zm00001d012391_P003	EnsemblPlants:Zm00001d012391_T003	SEG:seg	:	:

Description

Delta 1-pyrroline-5-carboxylate synthetase isoform 1%3B Delta 1-pyrroline-5-carboxylate synthetase isoform 2

Coordinates

chr8:-:173415190..173423162

Molecular Weight (calculated)

82458.6 Da

IEP (calculated)

8.287

GRAVY (calculated)

-0.085

Length

755 amino acids

Sequence
(BLAST)

001: MGRGGIGGAA AMAMAMETAD PARAFVKDVK RIIIKVGTAV VTGMNGRLAM GRLGSLCEQV KQLNFQGYEV ILVTSGAVGV GRQRLQYRKL IHSSFADLQN
101: PQMNFDGKAC AAVGQSVLMA IYDTLFSQLD VTSSQLLVTD RDFKDPSFGD QLRETVFSLL DLKVVPLFNE NDAISTRRQP YEDSSGIFWD NDSLAALLAA
201: ELNADLLIML SDVEGLYSGP PSDPQSKIIH TYVNEKHGKL ISFGEKSSVG RGGMQAKVSA AANAASKGVP VVIARTLRTT CDFVTLYEVG LQRIASLQFS
301: KAKRSVHFST TKQICGHVPR KLQPERWQLR QETVRGVYRN LIPSFLKTKK LKLSSEERKQ ILLDIADALE ANEDAIRSEN DADVEAAQVA GYEKSLVARM
401: TLKPGKITNL ARSIRKTADM EDPISHTLKR TEVAKDLVFE KAYCPLGVLL IIFESRPDAL VQIASLAIRS GNGLLLKGGK EVMRSNAILH KLDDVIDLVI
501: PRGSKSLVSQ IKATTKIPVL GHADGICHVY IDKSADMDMA KRIVLDAKID YPAACNAMET LLVHKDLNKS EGLDDLLVEL EKEGVVIYGG PVAHDKLKVP
601: KVDSFRHEYS SMACTVEFVD DVQSAIDHIN RYGSAHTDCI ITTDRSAAEA FLQQVDSAAV FHNASTRFCD GTRFGLGAEV GISTERIHAR GPVGVDGLLT
701: TRCILRGSGQ VVNGDKGVAN NLRCGRNEWL DSPFKYPFLL FHATKFGVVT SRMPI

Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)

001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA

Arabidopsis Description

P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.