Factsheet for Bra005012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000150.1-P
Bra005012.1-P
Bra017051.1-P
Bra036356.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	Bra000150.1-P	AT2G39800.1	21798944
AT2G39800.1	Bra005012.1-P	AT2G39800.1	21798944
AT2G39800.1	Bra017051.1-P	AT2G39800.1	21798944
AT2G39800.1	Bra036356.1-P	AT3G25930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20482	Canola	cytosol	99.72	99.72
CDX74830	Canola	cytosol	99.58	99.58
AT2G39800.1	Thale cress	cytosol	96.51	96.51
Bra017051.1-P	Field mustard	cytosol	95.82	95.82
Bra000150.1-P	Field mustard	cytosol	94.56	94.83
Bra007179.1-P	Field mustard	cytosol	88.84	87.62
Bra014732.1-P	Field mustard	cytosol	86.19	85.95
KRH73083	Soybean	endoplasmic reticulum	77.82	78.26
KRH15055	Soybean	nucleus	77.27	77.7
KRG97830	Soybean	endoplasmic reticulum	76.85	77.06
Solyc08g043170.2.1	Tomato	plastid	76.71	76.39
VIT_13s0019g02360.t01	Wine grape	cytosol	76.29	76.29
PGSC0003DMT400068829	Potato	cytosol	76.29	76.29
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	76.29	76.29
Os05t0455500-02	Rice	plasma membrane	74.9	75.0
PGSC0003DMT400068827	Potato	cytosol	65.83	74.68
KXG22139	Sorghum	cytosol	73.5	73.6
HORVU1Hr1G072780.1	Barley	cytosol	73.36	73.46
TraesCS1A01G281400.1	Wheat	cytosol	73.36	73.46
TraesCS1D01G280700.2	Wheat	golgi	73.22	73.32
TraesCS1B01G290600.2	Wheat	mitochondrion	73.22	73.32
GSMUA_Achr8P02490_001	Banana	cytosol	73.36	73.06
GSMUA_Achr10P...	Banana	cytosol	12.13	72.5
Zm00001d038358_P002	Maize	cytosol	71.13	69.96
KXG33696	Sorghum	cytosol	69.87	68.72
TraesCS3B01G395900.1	Wheat	cytosol	69.87	68.63
TraesCS3D01G357200.1	Wheat	cytosol	69.87	68.63
Os01t0848200-02	Rice	plasma membrane	70.29	68.57
Zm00001d010056_P002	Maize	cytosol	72.66	67.84
TraesCS3A01G363700.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	68.48	64.27
HORVU3Hr1G085760.5	Barley	cytosol, plastid	70.57	61.26
Zm00001d012391_P003	Maize	cytosol, peroxisome, plasma membrane	64.44	61.19
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.1	60.4

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	InterPro:Asp/Glu/Uridylate_kinase	EnsemblPlantsGene:Bra005012	EnsemblPlants:Bra005012.1
EnsemblPlants:Bra005012.1-P	ncoils:Coil	InterPro:G-glutamylP_reductase_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004349	GO:GO:0004350	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016620
GO:GO:0016740	GO:GO:0055114	GO:GO:0055129	InterPro:GPR_dom	InterPro:Glu/AcGlu_kinase	InterPro:Glu_5kinase/COase_Synthase
InterPro:Glutamate_5-kinase_CS	InterPro:IPR016162	InterPro:IPR016163	InterPro:IPR036393	UniProt:M4CLC5	HAMAP:MF_00412
HAMAP:MF_00456	InterPro:P5_carboxy_syn	PFAM:PF00171	PFAM:PF00696	PIRSF:PIRSF036429	PRINTS:PR00474
ScanProsite:PS00902	ScanProsite:PS01223	PANTHER:PTHR11063	PANTHER:PTHR11063:SF16	SUPFAM:SSF53633	SUPFAM:SSF53720
TIGRFAMs:TIGR00407	TIGRFAMs:TIGR01027	TIGRFAMs:TIGR01092	UniParc:UPI00025473DD	SEG:seg	:

Description

AT2G39800 (E=0.0) P5CS1, ATP5CS | P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1); delta1-pyrroline-5-carboxylate synthetase

Coordinates

chrA05:+:2977685..2981842

Molecular Weight (calculated)

77846.6 Da

IEP (calculated)

6.422

GRAVY (calculated)

-0.086

Length

717 amino acids

Sequence
(BLAST)

001: MEELDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQHEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KEFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFIKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYAAENIDKV LRGLRVGTLF HQDARLWAPI TDSTARDMAV
301: AARERSRKLQ ALSSEDRKQI LYSIADALEA NEKTIRAENE LDVATAQEAG LEESLVARLV MTPAKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NTTKIPVLGH ADGICHVYVD KACNVDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPK ASKILNLPEA RSFNHEYCSK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDPEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGITYTH QDIPIQA

Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)

001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA

Arabidopsis Description

P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.