Factsheet for GSMUA_Achr8P02490_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr8P02490_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	GSMUA_Achr10P...	AT2G39800.1	21798944
AT2G39800.1	GSMUA_Achr10P...	AT2G39800.1	21798944
AT2G39800.1	GSMUA_Achr8P02490_001	AT2G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	41.67	89.29
GSMUA_Achr10P...	Banana	cytosol	13.61	81.67
VIT_13s0019g02360.t01	Wine grape	cytosol	79.31	79.64
KRH15055	Soybean	nucleus	76.81	77.56
KRH73083	Soybean	endoplasmic reticulum	76.39	77.14
KRG97830	Soybean	endoplasmic reticulum	76.39	76.92
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	75.97	76.29
PGSC0003DMT400068829	Potato	cytosol	75.97	76.29
Solyc08g043170.2.1	Tomato	plastid	75.97	75.97
PGSC0003DMT400068827	Potato	cytosol	66.39	75.63
CDX76082	Canola	cytosol	74.44	74.86
CDY41203	Canola	cytosol	75.0	74.28
Bra007179.1-P	Field mustard	cytosol	75.0	74.28
CDY40241	Canola	cytosol	74.86	74.14
Bra014732.1-P	Field mustard	cytosol	74.03	74.13
CDY61781	Canola	cytosol	73.47	73.99
CDY07635	Canola	cytosol	73.47	73.99
Bra000150.1-P	Field mustard	cytosol	73.47	73.99
AT2G39800.1	Thale cress	cytosol	73.61	73.92
CDX93233	Canola	cytosol	73.19	73.5
CDY20482	Canola	cytosol	73.06	73.36
Bra005012.1-P	Field mustard	cytosol	73.06	73.36
CDY65768	Canola	cytosol	73.89	73.28
CDX74830	Canola	cytosol	72.92	73.22
CDY07034	Canola	cytosol	72.64	72.94
Bra017051.1-P	Field mustard	cytosol	72.5	72.8
AT3G55610.1	Thale cress	cytosol	72.92	72.31
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	29.72	71.81

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Asp/Glu/Uridylate_kinase	ncoils:Coil	InterPro:G-glutamylP_reductase_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004349	GO:GO:0004350	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006561	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016491	GO:GO:0016620	GO:GO:0016740	GO:GO:0055114	GO:GO:0055129	InterPro:GPR_dom
EnsemblPlantsGene:GSMUA_Achr8G02490_001	EnsemblPlants:GSMUA_Achr8P02490_001	EnsemblPlants:GSMUA_Achr8T02490_001	InterPro:Glu/AcGlu_kinase	InterPro:Glu_5kinase/COase_Synthase	InterPro:Glutamate_5-kinase_CS
InterPro:IPR016162	InterPro:IPR016163	InterPro:IPR036393	UniProt:M0TM01	HAMAP:MF_00412	HAMAP:MF_00456
InterPro:P5_carboxy_syn	PFAM:PF00696	PIRSF:PIRSF036429	PRINTS:PR00474	ScanProsite:PS00902	ScanProsite:PS01223
PANTHER:PTHR11063	PANTHER:PTHR11063:SF16	SUPFAM:SSF53633	SUPFAM:SSF53720	TIGRFAMs:TIGR00407	TIGRFAMs:TIGR01027
TIGRFAMs:TIGR01092	UniParc:UPI000296DC31	SEG:seg	:	:	:

Description

Delta-1-pyrroline-5-carboxylate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr8G02490_001]

Coordinates

chr8:-:1786978..1805130

Molecular Weight (calculated)

78562.1 Da

IEP (calculated)

6.366

GRAVY (calculated)

0.035

Length

720 amino acids

Sequence
(BLAST)

001: MDPTRDFIKG VKRLVIKVGT AVVTRTEGRL ALGRLGALCE QIKELNSSGF EVIMVTSGAV GVGRQRLRYR KLVNSSFADL QKPQVELDGK ACASVGQSGL
101: MALYDTLFSQ AWFLACFLLH ILLLLVTDSD FKDPDFRMQL SQTVNTLLAL RVIPVFNEND AISTRKAPYE DSFGIFWDND SLAALLALEL KADLLVLLSD
201: VEGLYSGPPG EPHSKLIHTY VKERHQSEIT FGDKSRVGRG GMTAKVKAAV YAAYAGIPVV ITSGFTTDSI TKVLKGERVG TLFHQDASKW MLLGEDGAHN
301: MAVSARECSR RLQTVSSEAR KKILLDIADA LEANEELIRT ENEADVAAAQ QAEYEKSLIS RLTLKPGKAR NYNLANSIRI LADMEDPIYR VLKRTELAEG
401: IILEKTSCPL GVLLIVFESR PDALVQIASL AIRSGNGLLL KGGKEAMRSN AILHKVITGA IPDFIGQKLI GLVTSRDEIP DLLKLDDVID LVIPRGSNKL
501: VDQIKESTKI PVLGHADGIC HVYVDKSADM EMAKHIVLDA KIDYPAACNA METLLIHKDL LKTEGLNDLI VELKSEGVAL FGGPRASLEF DIPEAPLLHH
601: EYNSMACTVE VVDDIHAAID HIHHHGSAHT DCIIAKDLEA AEIFLHQVDS AAVFYNASTR FCDGARFGLG AEVGISTSRI HARGPVGVEG LLTTRWILKG
701: NGQIVDGDKG VVYTHRNLPV

Best Arabidopsis Sequence Match ( AT3G55610.1 )
(BLAST)

001: MTEIDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA ICEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQMEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTVAQ MLVTDSSFRD KDFRKQLSET VKAMLRMRVI PVFNENDAIS TRRAPYKDST GIFWDNDSLA ALLSLELKAD LLILLSDVEG
201: LYTGPPSDST SKLIHTFIKE KHQDEITFGE KSKLGRGGMT AKVKAAVNAA YGGVPVIITS GYAAENISKV LRGLRVGTLF HQDAHLWAPV VDTTSRDMAV
301: AARESSRKLQ ALSSEDRKQI LHDIANALEV NEKTIKAEND LDVAAAQEAG YEESLVARLV MKPGKISSLA ASVRQLAEME DPIGRVLKKT QVADDLILEK
401: TSSPIGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NSTKIPVLGH ADGICHVYVD KSGKLDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNGF LDDLIYVLQT KGVTLYGGPR ASAKLNIPET KSFHHEYSSK
601: ACTVEIVEDV YGAIDHIHQH GSAHTDCIVT EDSEVAEIFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STSRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH KDLPVLQRTE AVENGI

Arabidopsis Description

P5CSBDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VF78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.