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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400068827
PGSC0003DMT400068829

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 PGSC0003DMT400068827 AT2G39800.1 21798944
AT2G39800.1 PGSC0003DMT400068829 AT2G39800.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400068827 Potato cytosol 87.31 99.05
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 98.88 98.88
KRH15055 Soybean nucleus 78.52 78.96
VIT_13s0019g02360.t01 Wine grape cytosol 78.52 78.52
KRH73083 Soybean endoplasmic reticulum 77.96 78.4
KRG97830 Soybean endoplasmic reticulum 77.13 77.34
AT2G39800.1 Thale cress cytosol 76.71 76.71
GSMUA_Achr10P... Banana cytosol 12.83 76.67
CDX74830 Canola cytosol 76.43 76.43
Bra005012.1-P Field mustard cytosol 76.29 76.29
CDY20482 Canola cytosol 76.15 76.15
CDY07635 Canola cytosol 75.87 76.08
Bra000150.1-P Field mustard cytosol 75.87 76.08
GSMUA_Achr8P02490_001 Banana cytosol 76.29 75.97
CDY61781 Canola cytosol 75.73 75.94
CDX76082 Canola cytosol 75.59 75.7
Bra014732.1-P Field mustard cytosol 75.73 75.52
CDX93233 Canola cytosol 75.31 75.31
Os05t0455500-02 Rice plasma membrane 75.03 75.14
CDY07034 Canola cytosol 74.9 74.9
HORVU1Hr1G072780.1 Barley cytosol 74.76 74.86
Bra017051.1-P Field mustard cytosol 74.76 74.76
CDY41203 Canola cytosol 75.73 74.69
CDY40241 Canola cytosol 75.73 74.69
Bra007179.1-P Field mustard cytosol 75.59 74.55
CDY65768 Canola cytosol 75.45 74.52
TraesCS1B01G290600.2 Wheat mitochondrion 74.34 74.44
KXG22139 Sorghum cytosol 74.34 74.44
TraesCS1A01G281400.1 Wheat cytosol 74.2 74.3
AT3G55610.1 Thale cress cytosol 75.17 74.24
TraesCS1D01G280700.2 Wheat golgi 74.06 74.16
Zm00001d038358_P002 Maize cytosol 73.5 72.29
KXG33696 Sorghum cytosol 71.97 70.78
Os01t0848200-02 Rice plasma membrane 71.97 70.2
TraesCS3B01G395900.1 Wheat cytosol 71.41 70.14
TraesCS3D01G357200.1 Wheat cytosol 71.41 70.14
Zm00001d010056_P002 Maize cytosol 74.9 69.92
TraesCS3A01G363700.2 Wheat endoplasmic reticulum, golgi, plasma membrane 70.43 66.1
Zm00001d012391_P003 Maize cytosol, peroxisome, plasma membrane 66.39 63.05
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 26.08 62.75
HORVU3Hr1G085760.5 Barley cytosol, plastid 71.69 62.23
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
EntrezGene:102594541Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1InterPro:AceGlu_kinase-like_sf
InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinaseInterPro:G-glutamylP_reductase_CS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004349GO:GO:0004350GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006561
GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114GO:GO:0055129
InterPro:GPR_domInterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163
InterPro:IPR036393UniProt:M1CJJ5HAMAP:MF_00412HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171
PFAM:PF00696EnsemblPlantsGene:PGSC0003DMG402026767PGSC:PGSC0003DMG402026767EnsemblPlants:PGSC0003DMT400068829PIRSF:PIRSF036429PRINTS:PR00474
ScanProsite:PS00902ScanProsite:PS01223PANTHER:PTHR11063PANTHER:PTHR11063:SF16SUPFAM:SSF53633SUPFAM:SSF53720
TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092UniParc:UPI000295E8D6RefSeq:XP_006346827.1SEG:seg
Description
Delta 1-pyrroline-5-carboxylate synthetase [Source:PGSC_GENE;Acc:PGSC0003DMG402026767]
Coordinates
chr6:+:15776837..15786259
Molecular Weight (calculated)
77478.1 Da
IEP (calculated)
5.781
GRAVY (calculated)
-0.023
Length
717 amino acids
Sequence
(BLAST)
001: MDSADPARAF VKDVKRIIIK VGTAVVTRGD GRLALGRMGS LCEQIRELTS QGFEVILVTS GAVGVGRQRL RYRKLINSSF ADLQKPQGDL DGKACAAVGQ
101: NGLMALYDTL FSQLDVTSAQ LMVTDNDFRD PDFRRQLNET VNSLLCLKVV PIFNENDAIS TRKAPYEDSS GIFWDNDSLA ALLAMELKAD LLVLLSDVEG
201: LYTGPPSDPQ SELIHTYVKE KHEGLITFGD KSRVGRGGMT AKVKAAVYAA YAGIPVVITS GFANNNIIKA LDGQRVGTLF HREAIKWASI GDFDAREMAV
301: SARECARRLQ TLSSQERSKI LLDIADALEA KEEEILAENE ADVAAAQQSG YENSLISRLA MKPGKISSLA NSVRVLANMD EPVGRILKRT ELADGIILEK
401: TSSPLGVLLI IFESRPDALV QIASLAVRSG NGLLLKGGKE AKRSNAILHK VITSSIPPTV GERLIGLVTS REEIPELLKL DDVIDLVIPR GSNKLVSQIK
501: AATKIPVLGH ADGICHVFID KSADLDMAKR IVLDAKTDYP AACNAMETLL VHEDLVQTGG LNDLILELQV KGVSLFGGPK ASSVLSIPEA NSFHHEYGAL
601: ACTVEIVEDV NTAIEHIHRH GSAHTDSIIT EDKEVAELFL RQVDSAAVLH NASTRFSDGF RFGLGAEVGI STSRIHARGP VGVEGLLTTR WLARGSGQVV
701: DGDKEIVYTH RDLNLEA
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.