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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, plasma membrane
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G281400.1
TraesCS1B01G290600.2
TraesCS1D01G280700.2
TraesCS3A01G363700.2
TraesCS3B01G395900.1
TraesCS3D01G357200.1
TraesCS7B01G254000.2
TraesCS7D01G155200.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 TraesCS1A01G281400.1 AT2G39800.1 21798944
AT2G39800.1 TraesCS1B01G290600.2 AT2G39800.1 21798944
AT2G39800.1 TraesCS1D01G280700.2 AT2G39800.1 21798944
AT2G39800.1 TraesCS3A01G363700.2 AT2G39800.1 21798944
AT2G39800.1 TraesCS3B01G395900.1 AT2G39800.1 21798944
AT2G39800.1 TraesCS3D01G357200.1 AT2G39800.1 21798944
AT2G39800.1 TraesCS7B01G254000.2 AT5G20010.1 21798944
AT2G39800.1 TraesCS7D01G155200.2 AT5G20010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G290600.2 Wheat mitochondrion 99.16 99.16
TraesCS1A01G281400.1 Wheat cytosol 99.02 99.02
HORVU1Hr1G072780.1 Barley cytosol 97.49 97.49
Os05t0455500-02 Rice plasma membrane 87.71 87.71
KXG22139 Sorghum cytosol 86.59 86.59
Zm00001d038358_P002 Maize cytosol 82.54 81.07
GSMUA_Achr10P... Banana cytosol 13.55 80.83
Zm00001d010056_P002 Maize cytosol 85.34 79.56
VIT_13s0019g02360.t01 Wine grape cytosol 76.12 76.01
KRH73083 Soybean endoplasmic reticulum 75.56 75.88
KRH15055 Soybean nucleus 75.14 75.46
KRG97830 Soybean endoplasmic reticulum 74.58 74.69
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 74.58 74.48
PGSC0003DMT400068829 Potato cytosol 74.16 74.06
Solyc08g043170.2.1 Tomato plastid 74.44 74.03
TraesCS3D01G357200.1 Wheat cytosol 75.42 73.97
Bra005012.1-P Field mustard cytosol 73.32 73.22
CDX74830 Canola cytosol 73.18 73.08
CDY20482 Canola cytosol 73.18 73.08
PGSC0003DMT400068827 Potato cytosol 64.39 72.94
AT2G39800.1 Thale cress cytosol 72.77 72.66
CDX93233 Canola cytosol 72.77 72.66
CDY07034 Canola cytosol 72.63 72.52
CDX76082 Canola cytosol 72.35 72.35
Bra000150.1-P Field mustard cytosol 72.21 72.31
CDY07635 Canola cytosol 72.21 72.31
Bra014732.1-P Field mustard cytosol 72.49 72.18
CDY61781 Canola cytosol 72.07 72.17
Bra017051.1-P Field mustard cytosol 72.21 72.11
CDY41203 Canola cytosol 72.77 71.66
Bra007179.1-P Field mustard cytosol 72.63 71.53
CDY40241 Canola cytosol 72.63 71.53
AT3G55610.1 Thale cress cytosol 72.49 71.49
CDY65768 Canola cytosol 71.93 70.94
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 25.42 61.07
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinaseGO:GO:0003674GO:GO:0003824
GO:GO:0004349GO:GO:0004350GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006561GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016301
GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114InterPro:GPR_domInterPro:Glu/AcGlu_kinase
InterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163InterPro:IPR036393HAMAP:MF_00412
HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474
ScanProsite:PS00902PANTHER:PTHR11063PANTHER:PTHR11063:SF16SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407
TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092EnsemblPlantsGene:TraesCS1D01G280700EnsemblPlants:TraesCS1D01G280700.2TIGR:cd04256TIGR:cd07079
SEG:seg:::::
Description
No Description!
Coordinates
chr1D:-:379137882..379145406
Molecular Weight (calculated)
77687.7 Da
IEP (calculated)
6.659
GRAVY (calculated)
-0.061
Length
716 amino acids
Sequence
(BLAST)
001: MAGADLNRSF IKDVKRIIIK VGTAVITRND GRLALGRIGA LCEQVKDLNA QGYEVIMVTS GAVGVGRQRL RYRKLVNSSF ADLQKPQMEL DGKACAAVGQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFDN SNFRERLRET VESLLELRVI PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLALELKAD LLVLLSDVDG
201: LYSGPPSEPS SKLIHTYIKE KHYHEITFGD KSRVGRGGMT AKVQAAVWAS TGGVPVVITS GCASQSLVKV LRGEKIGTLF HKNASLWEPS KDTSVREMAV
301: AARDCSRRLQ NLTSEERKKI LVDVADALEA NEDLIRSENE ADLAAAHEAG YESALVSRLT LKPGKIASLA KSVRTLANME DPINEILKRT EVADGLVLEK
401: TSCPLGVLLI IFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNAILHK VITNAIPNNV GEKLIGLITT RDEIADLLKH DDVIDLVIPR GSNKLVAQIK
501: SSTKIPVLGH ADGVCHVYID KSADMDMAKR IVMDAKIDYP AACNAMETLL VHKDLMKTPE LNDILVALKT AGVNLYCGPV AHKVLGYPKA DSLHLEYSSM
601: ACTVEIVDDV QSAIDHIHRY GSAHTDCVVT TDDKVAETFL RQVDSAAVLY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WLLRGKGQVV
701: NGDKDVEYTH KSLPLQ
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.