Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 4
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G395900.1 | Wheat | cytosol | 91.62 | 95.89 |
TraesCS3D01G357200.1 | Wheat | cytosol | 91.62 | 95.89 |
Os01t0848200-02 | Rice | plasma membrane | 83.12 | 86.39 |
KXG33696 | Sorghum | cytosol | 81.81 | 85.73 |
HORVU3Hr1G085760.5 | Barley | cytosol, plastid | 90.71 | 83.9 |
TraesCS1A01G281400.1 | Wheat | cytosol | 70.16 | 74.86 |
Zm00001d012391_P003 | Maize | cytosol, peroxisome, plasma membrane | 72.77 | 73.64 |
VIT_13s0019g02360.t01 | Wine grape | cytosol | 67.93 | 72.38 |
KRH15055 | Soybean | nucleus | 66.49 | 71.25 |
KRH73083 | Soybean | endoplasmic reticulum | 66.36 | 71.11 |
PGSC0003DMT400068829 | Potato | cytosol | 66.1 | 70.43 |
Solyc08g043170.2.1 | Tomato | plastid | 66.23 | 70.28 |
Solyc06g019170.2.1 | Tomato | nucleus, plastid, unclear | 65.84 | 70.15 |
KRG97830 | Soybean | endoplasmic reticulum | 65.58 | 70.07 |
PGSC0003DMT400068827 | Potato | cytosol | 57.07 | 68.99 |
CDY07635 | Canola | cytosol | 64.4 | 68.81 |
Bra000150.1-P | Field mustard | cytosol | 64.4 | 68.81 |
CDX76082 | Canola | cytosol | 64.4 | 68.72 |
CDY61781 | Canola | cytosol | 64.27 | 68.67 |
CDX74830 | Canola | cytosol | 64.4 | 68.62 |
AT2G39800.1 | Thale cress | cytosol | 64.4 | 68.62 |
Bra005012.1-P | Field mustard | cytosol | 64.27 | 68.48 |
CDY20482 | Canola | cytosol | 64.14 | 68.34 |
Bra014732.1-P | Field mustard | cytosol | 64.27 | 68.29 |
CDX93233 | Canola | cytosol | 64.01 | 68.2 |
CDY07034 | Canola | cytosol | 63.74 | 67.92 |
CDY40241 | Canola | cytosol | 64.53 | 67.81 |
Bra007179.1-P | Field mustard | cytosol | 64.53 | 67.81 |
CDY41203 | Canola | cytosol | 64.4 | 67.68 |
AT3G55610.1 | Thale cress | cytosol | 64.27 | 67.63 |
Bra017051.1-P | Field mustard | cytosol | 63.35 | 67.5 |
CDY65768 | Canola | cytosol | 63.74 | 67.08 |
GSMUA_Achr10P... | Banana | cytosol | 10.47 | 66.67 |
GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 23.3 | 59.73 |
Protein Annotations
Description
No Description!
Coordinates
chr3A:+:611964983..611970702
Molecular Weight (calculated)
82493.6 Da
IEP (calculated)
6.823
GRAVY (calculated)
-0.008
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFFLLLLP SRYETNAAAV AAVLLGLFAA VPFVSPPLLL RRDPGPSAAG TGDRRKRRGW HGRKGSDLVG TAVVTGQNGR LAMGRLGALC EQVKELNFQG
101: YEVILVTSGA VGVGRQRLKY RKLINSSFAD LQNPQLDLDG KACAAVGQSG LMAIYDTLFS QLDVTSSQLL VTDRDFRDPS FGHQLRETVV SLLDLKVIPV
201: FNENDAISTR RAPYEDSSGI FWDNDSLATL LAKELDADLL IMLSDVEGLY SGPPSDPQSK IIHTYINEKH GKLINFGEKS RVGRGGMQAK VAAAVTAASK
301: GVPAVIASGF VTDSIIKIMR GEKIGTLFHN EANVWDCSKE VTTREMAVAA KDCSRHLQNL SSEERKKILL DIAGALDANV DLIISENEAD LAAAQDSGYE
401: KSLVARMTLK AGKITSLAES IRAIADMEDP ISHTLKKTEV AKDLVFEKMY CPLGVLLIIF ESRPDALVQI AALAIRSGNG LLLKGGKEAM RSNTILHKVI
501: TSVIPDVVGK KLIGLVKSKD EIADLLKLDD VIDLVIPRGS NRLVSQIKAQ TKIPVLGHAD GICHVYIDKS ADMDMAKRIV LDAKVDYPAA CNAMETLLVH
601: KDLNKTEGLD DLLMELAKEG VVIYGGPVAH DTLKVPKVDS FHHEYSSMAC TLEFVDDVQS AIDHINRYGS AHTDCIITTD KKSADTFLQQ VDSAAVFHNA
701: STRFCDGTRF GLGAEVGIST GRIHARGPVG VDGLLTTRCI LRGSGQVVNG DKGVVYTHKD LPLQ
101: YEVILVTSGA VGVGRQRLKY RKLINSSFAD LQNPQLDLDG KACAAVGQSG LMAIYDTLFS QLDVTSSQLL VTDRDFRDPS FGHQLRETVV SLLDLKVIPV
201: FNENDAISTR RAPYEDSSGI FWDNDSLATL LAKELDADLL IMLSDVEGLY SGPPSDPQSK IIHTYINEKH GKLINFGEKS RVGRGGMQAK VAAAVTAASK
301: GVPAVIASGF VTDSIIKIMR GEKIGTLFHN EANVWDCSKE VTTREMAVAA KDCSRHLQNL SSEERKKILL DIAGALDANV DLIISENEAD LAAAQDSGYE
401: KSLVARMTLK AGKITSLAES IRAIADMEDP ISHTLKKTEV AKDLVFEKMY CPLGVLLIIF ESRPDALVQI AALAIRSGNG LLLKGGKEAM RSNTILHKVI
501: TSVIPDVVGK KLIGLVKSKD EIADLLKLDD VIDLVIPRGS NRLVSQIKAQ TKIPVLGHAD GICHVYIDKS ADMDMAKRIV LDAKVDYPAA CNAMETLLVH
601: KDLNKTEGLD DLLMELAKEG VVIYGGPVAH DTLKVPKVDS FHHEYSSMAC TLEFVDDVQS AIDHINRYGS AHTDCIITTD KKSADTFLQQ VDSAAVFHNA
701: STRFCDGTRF GLGAEVGIST GRIHARGPVG VDGLLTTRCI LRGSGQVVNG DKGVVYTHKD LPLQ
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.