Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70904
CDX74830
CDX83574
CDX93233
CDX99737
CDY07034
CDY07635
CDY13601
CDY20482
CDY40982
CDY61781

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 CDX74830 AT2G39800.1 21798944
AT2G39800.1 CDX93233 AT2G39800.1 21798944
AT2G39800.1 CDY07034 AT2G39800.1 21798944
AT2G39800.1 CDY07635 AT2G39800.1 21798944
AT2G39800.1 CDY20482 AT2G39800.1 21798944
AT2G39800.1 CDY61781 AT2G39800.1 21798944
AT2G39800.1 CDX83574 AT3G25930.1 21798944
AT2G39800.1 CDX99737 AT3G25930.1 21798944
AT2G39800.1 CDY13601 AT3G25930.1 21798944
AT2G39800.1 CDY40982 AT3G25930.1 21798944
AT2G39800.1 CDX70904 AT5G20010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07635 Canola cytosol 99.44 99.44
Bra000150.1-P Field mustard cytosol 99.3 99.3
CDY20482 Canola cytosol 94.41 94.14
CDX74830 Canola cytosol 94.27 94.0
CDX93233 Canola cytosol 93.29 93.03
AT2G39800.1 Thale cress cytosol 93.29 93.03
CDY07034 Canola cytosol 93.01 92.75
CDY41203 Canola cytosol 87.13 85.69
CDY40241 Canola cytosol 86.85 85.42
CDX76082 Canola cytosol 84.48 84.36
CDY65768 Canola cytosol 84.62 83.33
KRH73083 Soybean endoplasmic reticulum 77.9 78.12
KRH15055 Soybean nucleus 77.34 77.56
KRG97830 Soybean endoplasmic reticulum 76.64 76.64
Solyc08g043170.2.1 Tomato plastid 76.5 75.97
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 75.94 75.73
PGSC0003DMT400068829 Potato cytosol 75.94 75.73
VIT_13s0019g02360.t01 Wine grape cytosol 75.66 75.45
PGSC0003DMT400068827 Potato cytosol 65.59 74.21
Os05t0455500-02 Rice plasma membrane 74.27 74.16
GSMUA_Achr8P02490_001 Banana cytosol 73.99 73.47
KXG22139 Sorghum cytosol 73.29 73.18
HORVU1Hr1G072780.1 Barley cytosol 72.31 72.21
TraesCS1A01G281400.1 Wheat cytosol 72.31 72.21
TraesCS1B01G290600.2 Wheat mitochondrion 72.17 72.07
TraesCS1D01G280700.2 Wheat golgi 72.17 72.07
GSMUA_Achr10P... Banana cytosol 12.03 71.67
Zm00001d038358_P002 Maize cytosol 70.07 68.72
TraesCS3B01G395900.1 Wheat cytosol 70.07 68.63
TraesCS3D01G357200.1 Wheat cytosol 70.07 68.63
KXG33696 Sorghum cytosol 69.51 68.18
Os01t0848200-02 Rice plasma membrane 69.65 67.76
Zm00001d010056_P002 Maize cytosol 71.89 66.93
TraesCS3A01G363700.2 Wheat endoplasmic reticulum, golgi, plasma membrane 68.67 64.27
HORVU3Hr1G085760.5 Barley cytosol, plastid 70.77 61.26
Zm00001d012391_P003 Maize cytosol, peroxisome, plasma membrane 64.48 61.06
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 25.04 60.07
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1GO:A0A078JC38UniProt:A0A078JC38
InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinase
EnsemblPlants:CDY61781ProteinID:CDY61781ProteinID:CDY61781.1InterPro:G-glutamylP_reductase_CSGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004349GO:GO:0004350GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006561GO:GO:0008150GO:GO:0008152
GO:GO:0008652GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016491
GO:GO:0016620GO:GO:0016740GO:GO:0055114GO:GO:0055129InterPro:GPR_domEnsemblPlantsGene:GSBRNA2T00034359001
InterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163InterPro:IPR036393
HAMAP:MF_00412HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696PIRSF:PIRSF036429
PRINTS:PR00474ScanProsite:PS00902ScanProsite:PS01223PANTHER:PTHR11063PANTHER:PTHR11063:SF16MetaCyc:PWY-3341
MetaCyc:PWY-6922SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092
UniPathway:UPA00098UniParc:UPI0004EF26A8SEG:seg:::
Description
BnaC03g72600DDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A078JC38]
Coordinates
chrLK034038:-:12399..16650
Molecular Weight (calculated)
77428.8 Da
IEP (calculated)
5.775
GRAVY (calculated)
-0.072
Length
715 amino acids
Sequence
(BLAST)
001: MEETDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVTS GAVGLGRQRL RYRQMINSSF ADLQKPQSEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLSET VKSMLDLSVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPD SKLIHTFIKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GFSTENIDKV LRGLRVGTLF HQDACQWAPV TDSTARDMAV
301: AARESSRKLQ ALSSEDRKQI LYNVADALEA NVETIRAENE LDVAAAQEAG LEESMVARLF MTPAKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: STTKIPVLGH ADGICHVYVD KACNVDMAKR IVSDSKLDYP AACNAMETLL VHKDHEQNGV LNDLIFVLQN NGVTLYGGPK ASKIMNIPQA PTFNHEYCSK
601: ACTVEVVEDV YAAIDHIHRH GSAHTDCILT EDPEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STGRIHARGP VGVEGLLTTR WILRGNGQVV
701: DGDNGIAYTH QDIPI
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.