Factsheet for Zm00001d010056_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010056_P002
Zm00001d011328_P001
Zm00001d011474_P001
Zm00001d012391_P003
Zm00001d038358_P002
Zm00001d039090_P001
Zm00001d039091_P002
Zm00001d044054_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	Zm00001d010056_P002	AT2G39800.1	21798944
AT2G39800.1	Zm00001d012391_P003	AT2G39800.1	21798944
AT2G39800.1	Zm00001d038358_P002	AT2G39800.1	21798944
AT2G39800.1	Zm00001d011328_P001	AT5G20010.1	21798944
AT2G39800.1	Zm00001d011474_P001	AT5G20010.1	21798944
AT2G39800.1	Zm00001d039090_P001	AT5G20010.1	21798944
AT2G39800.1	Zm00001d039091_P002	AT5G20010.1	21798944
AT2G39800.1	Zm00001d044054_P002	AT5G20010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22139	Sorghum	cytosol	87.5	93.85
Zm00001d038358_P002	Maize	cytosol	84.24	88.75
Os05t0455500-02	Rice	plasma membrane	82.29	88.27
TraesCS1B01G290600.2	Wheat	mitochondrion	79.95	85.75
TraesCS1A01G281400.1	Wheat	cytosol	79.95	85.75
HORVU1Hr1G072780.1	Barley	cytosol	79.82	85.61
TraesCS1D01G280700.2	Wheat	golgi	79.56	85.34
GSMUA_Achr10P...	Banana	cytosol	12.24	78.33
KRH15055	Soybean	nucleus	71.88	77.42
KRH73083	Soybean	endoplasmic reticulum	71.48	77.0
VIT_13s0019g02360.t01	Wine grape	cytosol	71.88	76.99
KRG97830	Soybean	endoplasmic reticulum	70.31	75.52
PGSC0003DMT400068829	Potato	cytosol	69.92	74.9
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	69.92	74.9
Solyc08g043170.2.1	Tomato	plastid	70.18	74.86
PGSC0003DMT400068827	Potato	cytosol	60.55	73.58
Bra005012.1-P	Field mustard	cytosol	67.84	72.66
CDY20482	Canola	cytosol	67.71	72.52
CDX74830	Canola	cytosol	67.71	72.52
CDY07034	Canola	cytosol	67.58	72.38
CDX76082	Canola	cytosol	67.45	72.35
CDX93233	Canola	cytosol	67.45	72.25
AT2G39800.1	Thale cress	cytosol	67.32	72.11
CDY07635	Canola	cytosol	67.06	72.03
Bra000150.1-P	Field mustard	cytosol	67.06	72.03
Bra017051.1-P	Field mustard	cytosol	67.19	71.97
Bra014732.1-P	Field mustard	cytosol	67.32	71.91
CDY61781	Canola	cytosol	66.93	71.89
CDY41203	Canola	cytosol	67.32	71.11
Bra007179.1-P	Field mustard	cytosol	67.32	71.11
AT3G55610.1	Thale cress	cytosol	67.19	71.07
CDY40241	Canola	cytosol	67.19	70.98
CDY65768	Canola	cytosol	66.8	70.66
Zm00001d012391_P003	Maize	cytosol, peroxisome, plasma membrane	65.62	66.75
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.74	63.76
Zm00001d005299_P001	Maize	mitochondrion	19.66	40.37
Zm00001d019946_P001	Maize	mitochondrion	5.86	18.44

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	EntrezGene:778431	UniProt:A0A1D6FNZ7
ProteinID:AQK93358.1	InterPro:AceGlu_kinase-like_sf	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Asp/Glu/Uridylate_kinase
InterPro:G-glutamylP_reductase_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004349	GO:GO:0004350
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016620	GO:GO:0016740	GO:GO:0055114
GO:GO:0055129	InterPro:GPR_dom	InterPro:Glu/AcGlu_kinase	InterPro:Glu_5kinase/COase_Synthase	InterPro:Glutamate_5-kinase_CS	InterPro:IPR016162
InterPro:IPR016163	InterPro:IPR036393	HAMAP:MF_00412	HAMAP:MF_00456	InterPro:P5_carboxy_syn	PFAM:PF00696
PIRSF:PIRSF036429	PRINTS:PR00474	ScanProsite:PS00902	ScanProsite:PS01223	PANTHER:PTHR11063	PANTHER:PTHR11063:SF13
SUPFAM:SSF53633	SUPFAM:SSF53720	TIGRFAMs:TIGR00407	TIGRFAMs:TIGR01027	UniParc:UPI000842FAD5	EnsemblPlantsGene:Zm00001d010056
EnsemblPlants:Zm00001d010056_P002	EnsemblPlants:Zm00001d010056_T002	SEG:seg	:	:	:

Description

proline responding1 proline responding1

Coordinates

chr8:+:97510673..97521556

Molecular Weight (calculated)

83504.8 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.054

Length

768 amino acids

Sequence
(BLAST)

001: MATADRTRTF MKDVKRVIIK VGTAVVTRGD DGRLAVGRLG CLCEQVKELN VLGYEVILVT SGAVGVGKQR LKYRKLVNSS FADLQKPQME LDGKACAAVG
101: QSGLMALYDM LFTQLDVSSS QLLVTDSDFE NPNFRERLCE TVESLLDLKV VPIFNENDAI STRKAPYEDS SGIFWDNDSL AGLLAIELKA DLLVLLSDVD
201: GLYSGPPSEP GSKIIHTYIK DKHYSGITFG DKSRVGRGGM TAKVKAAFVA SNSGTPVVIT SGFASQSIVR VLQGEKIGTL FHKDASLWEP SKDVSAREMA
301: VAARECSRRL QNLSSDERKK ILLDIADALE QNEDLIRTEN EADVSAAQDA GYQKSLVDRL TLKPEKIASL AKSIRTLANM EDPINQILKR TEVTAYKLLT
401: KEKLTYFIPK TNVTSARVLF QVAEDLVLEK TSCPLGVLLI VFESRPDALV QIASLAVRSG NGLLLKGGKE AMRSNTVLHK VITGAIPDNV GQKLIGLVTS
501: RDEIADLLKL DDVIDLVIPR GSNKLVSQIK ASTKIPVLGH ADGICHVYID KSADMNMAKR IVMDAKTDYP AACNAMVVVL EQPDCLEDDS AMLVKHGRET
601: LLVHKDLIKA PGLDDILLSL KTEGVAIYGG PVAHEVLCIP KADSFHHEYS SMACTIEFVD DVQSAINHIH RYGSAHTDCI ITTDDKVAET FLRQVDSAAV
701: FHNASTRFSD GARFGLGAEV GISTGRIHAR GPVGVEGLLT TRWIMRGSGQ VVNGDKNVAY THKNLPLQ

Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)

001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA

Arabidopsis Description

P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.