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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG97830
KRH15055
KRH73083

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 KRG97830 AT2G39800.1 21798944
AT2G39800.1 KRH15055 AT2G39800.1 21798944
AT2G39800.1 KRH73083 AT2G39800.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH73083 Soybean endoplasmic reticulum 87.69 87.94
KRH15055 Soybean nucleus 86.99 87.24
VIT_13s0019g02360.t01 Wine grape cytosol 79.58 79.36
GSMUA_Achr10P... Banana cytosol 13.01 77.5
Solyc08g043170.2.1 Tomato plastid 77.9 77.36
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 77.48 77.27
PGSC0003DMT400068829 Potato cytosol 77.34 77.13
Bra000150.1-P Field mustard cytosol 77.06 77.06
CDY07635 Canola cytosol 77.06 77.06
Bra005012.1-P Field mustard cytosol 77.06 76.85
CDY20482 Canola cytosol 77.06 76.85
CDX74830 Canola cytosol 76.92 76.71
CDY61781 Canola cytosol 76.64 76.64
AT2G39800.1 Thale cress cytosol 76.64 76.43
GSMUA_Achr8P02490_001 Banana cytosol 76.92 76.39
PGSC0003DMT400068827 Potato cytosol 67.41 76.27
CDX76082 Canola cytosol 76.22 76.12
Os05t0455500-02 Rice plasma membrane 76.08 75.98
CDX93233 Canola cytosol 76.08 75.87
CDY07034 Canola cytosol 75.94 75.73
Bra017051.1-P Field mustard cytosol 75.94 75.73
Bra014732.1-P Field mustard cytosol 76.08 75.66
CDY41203 Canola cytosol 76.78 75.52
CDY65768 Canola cytosol 76.5 75.34
HORVU1Hr1G072780.1 Barley cytosol 75.38 75.28
TraesCS1B01G290600.2 Wheat mitochondrion 75.38 75.28
KXG22139 Sorghum cytosol 75.38 75.28
CDY40241 Canola cytosol 76.5 75.24
Bra007179.1-P Field mustard cytosol 76.5 75.24
TraesCS1A01G281400.1 Wheat cytosol 75.1 75.0
AT3G55610.1 Thale cress cytosol 75.94 74.79
TraesCS1D01G280700.2 Wheat golgi 74.69 74.58
KRH00047 Soybean cytosol 74.55 74.03
KRH75663 Soybean endoplasmic reticulum 76.36 72.32
KRH65894 Soybean cytosol 76.22 72.09
Zm00001d038358_P002 Maize cytosol 72.73 71.33
Zm00001d010056_P002 Maize cytosol 75.52 70.31
KXG33696 Sorghum cytosol 71.61 70.23
Os01t0848200-02 Rice plasma membrane 72.03 70.07
TraesCS3B01G395900.1 Wheat cytosol 71.33 69.86
TraesCS3D01G357200.1 Wheat cytosol 71.33 69.86
KRH49172 Soybean cytosol, plastid 74.55 69.67
TraesCS3A01G363700.2 Wheat endoplasmic reticulum, golgi, plasma membrane 70.07 65.58
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 26.29 63.09
Zm00001d012391_P003 Maize cytosol, peroxisome, plasma membrane 65.45 61.99
HORVU3Hr1G085760.5 Barley cytosol, plastid 71.61 61.99
KRH15781 Soybean cytosol 4.76 43.59
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1UniProt:A0A0R0EVL3EMBL:ACUP02010821
InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinase
EnsemblPlantsGene:GLYMA_18G034300GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004349GO:GO:0004350
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006561GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987
GO:GO:0016301GO:GO:0016310GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114
GO:GO:0055129InterPro:GPR_domInterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162
InterPro:IPR016163InterPro:IPR036393EnsemblPlants:KRG97830ProteinID:KRG97830ProteinID:KRG97830.1HAMAP:MF_00412
HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474
ScanProsite:PS00902PANTHER:PTHR11063PANTHER:PTHR11063:SF16MetaCyc:PWY-3341MetaCyc:PWY-6922SUPFAM:SSF53633
SUPFAM:SSF53720TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092UniParc:UPI00019AA86DSEG:seg
Description
hypothetical protein
Coordinates
chr18:+:2647511..2653492
Molecular Weight (calculated)
78016.4 Da
IEP (calculated)
7.047
GRAVY (calculated)
-0.031
Length
715 amino acids
Sequence
(BLAST)
001: MENTDPCRHF LKDVKRIIIK VGTAVVTRQD GRLAVGKLGA LCEQIKELNS LGYEIILVSS GAVGLGRQRL RYRKLINSSF ADLQKPQVEL DGKACAAVGQ
101: NSLMALYDVL FSQLDVTSAQ LLVTDNDFRD KDFRMQLSET MKSLLALKVI PIFNENDAVS TRKAPYEDSS GIFWDNDSLS ALLALELKAD LLILLSDVEG
201: LYSGPPSDPR SKLIHTYIKE KHQSEITFGD KSRVGRGGMT AKVKASIHAA EAGIPVIITS GYAAENIIKV LQGQRIGTLF HKDAHKWAPV KEVDAREMAV
301: AARDCSRRLQ ALSSEERKQI LLKIADALEA HQNEIRIENE ADVADAKEAG YEKSLVARLV LKNEKLASLA NNIRIIANME DPIGRVLKRT ELAEGLILEK
401: TSSSLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE AKRSNAILHK VITEAIPDIV GSKLIGLVTS RAEIPELLKL DDVIDLVIPR GSNKLVTQIK
501: SSTKIPVLGH ADGICHVYVD KSADLEMARR IVLDAKIDYP AGCNAMETLL VHKDLVEKGW LNSIIIDLRT EGVTLYGGPK ASPLLNIPMA RMLHHEYNSL
601: ACTVEIVDDV YAAIDHINLY GSAHTDSVVA EDHEVANVFL RQVDSAAVFH NASTRFSDGA RFGLGAEVGI STSRIHARGP VGVDGLLTTR WILKGSGQIV
701: DGDKAVNYTH RDLSI
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.