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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plasma membrane 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G290600.2 Wheat mitochondrion 97.77 97.77
TraesCS1A01G281400.1 Wheat cytosol 97.63 97.63
TraesCS1D01G280700.2 Wheat golgi 97.49 97.49
Os05t0455500-02 Rice plasma membrane 88.41 88.41
KXG22139 Sorghum cytosol 86.73 86.73
Zm00001d038358_P002 Maize cytosol 82.54 81.07
GSMUA_Achr10P... Banana cytosol 13.55 80.83
Zm00001d010056_P002 Maize cytosol 85.61 79.82
VIT_13s0019g02360.t01 Wine grape cytosol 76.4 76.29
KRH73083 Soybean endoplasmic reticulum 75.84 76.16
KRH15055 Soybean nucleus 75.56 75.88
KRG97830 Soybean endoplasmic reticulum 75.28 75.38
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 75.28 75.17
PGSC0003DMT400068829 Potato cytosol 74.86 74.76
Solyc08g043170.2.1 Tomato plastid 74.86 74.44
PGSC0003DMT400068827 Potato cytosol 65.08 73.73
Bra005012.1-P Field mustard cytosol 73.46 73.36
CDY20482 Canola cytosol 73.32 73.22
CDX74830 Canola cytosol 73.32 73.22
AT2G39800.1 Thale cress cytosol 73.18 73.08
CDX93233 Canola cytosol 72.91 72.8
CDY07034 Canola cytosol 72.77 72.66
Bra000150.1-P Field mustard cytosol 72.35 72.45
CDY07635 Canola cytosol 72.35 72.45
CDX76082 Canola cytosol 72.35 72.35
CDY61781 Canola cytosol 72.21 72.31
Bra017051.1-P Field mustard cytosol 72.35 72.25
Bra014732.1-P Field mustard cytosol 72.49 72.18
AT3G55610.1 Thale cress cytosol 72.77 71.76
CDY41203 Canola cytosol 72.77 71.66
Bra007179.1-P Field mustard cytosol 72.63 71.53
CDY40241 Canola cytosol 72.63 71.53
CDY65768 Canola cytosol 71.93 70.94
HORVU3Hr1G085760.5 Barley cytosol, plastid 75.7 65.62
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 25.7 61.74
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1UniProt:A0A287G756InterPro:AceGlu_kinase-like_sf
InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinaseGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004349GO:GO:0004350GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006561GO:GO:0008150
GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114GO:GO:0055129InterPro:GPR_dom
InterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSEnsemblPlantsGene:HORVU1Hr1G072780EnsemblPlants:HORVU1Hr1G072780.1InterPro:IPR016162
InterPro:IPR016163InterPro:IPR036393HAMAP:MF_00412HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171
PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474ScanProsite:PS00902PANTHER:PTHR11063PANTHER:PTHR11063:SF16
SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092UniParc:UPI000B485A20
SEG:seg:::::
Description
Delta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A287G756]
Coordinates
chrchr1H:-:498975383..498982941
Molecular Weight (calculated)
77532.4 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.040
Length
716 amino acids
Sequence
(BLAST)
001: MASADPNRSF IKDVKRIIIK VGTAVITRND GRLALGRIGS LCEQVKDLNA QGYEVIMVTS GAVGVGRQRL RYRKLVNSSF ADLQKPQMEL DGKACAAVGQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFDN SNFRERLRET VESLLELRVI PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLALELKAD LLVLLSDVDG
201: LYSGPPSEPS SKLIHTYIKE KHYHEITFGD KSRVGRGGMT AKVQAAVWAS TGGVPVVITS GCASQSLVKV LRGEKIGTLF HKNASSWEPS KDASVREMAV
301: AARDCSRRLQ NLSSEERKKI LLDVADALEA NEDLIRSENE ADVAAAHEAG YESALVARLT LKPGKIASLA KSVRTLANME DPINEILKRT EVADGLVLEK
401: TSCPLGVLLI IFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNAILHK VITNAIPDNV GEKLIGLITT RDEIADLLKL DDVIDLVIPR GSNKLVAQIK
501: ASTKIPVLGH ADGVCHVYID KSADMDMAKR IVVDAKIDYP AACNAMETLL VHKDLMKTPE LDDILVALKT AGVNLYCGPV AHKILGYPKA DSLHLEYSSM
601: ACTVEIVDDV QSAIDHIHRY GSAHTDCVVT TDDTVAETFL RQVDSAAVLY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WLLRGKGQIV
701: NGDKDVVYTH KSLPLQ
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.