Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU1Hr1G072780.1 | |
HORVU3Hr1G085760.5 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G39800.1 | HORVU1Hr1G072780.1 | AT2G39800.1 | 21798944 |
AT2G39800.1 | HORVU3Hr1G085760.5 | AT2G39800.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G290600.2 | Wheat | mitochondrion | 97.77 | 97.77 |
TraesCS1A01G281400.1 | Wheat | cytosol | 97.63 | 97.63 |
TraesCS1D01G280700.2 | Wheat | golgi | 97.49 | 97.49 |
Os05t0455500-02 | Rice | plasma membrane | 88.41 | 88.41 |
KXG22139 | Sorghum | cytosol | 86.73 | 86.73 |
Zm00001d038358_P002 | Maize | cytosol | 82.54 | 81.07 |
GSMUA_Achr10P... | Banana | cytosol | 13.55 | 80.83 |
Zm00001d010056_P002 | Maize | cytosol | 85.61 | 79.82 |
VIT_13s0019g02360.t01 | Wine grape | cytosol | 76.4 | 76.29 |
KRH73083 | Soybean | endoplasmic reticulum | 75.84 | 76.16 |
KRH15055 | Soybean | nucleus | 75.56 | 75.88 |
KRG97830 | Soybean | endoplasmic reticulum | 75.28 | 75.38 |
Solyc06g019170.2.1 | Tomato | nucleus, plastid, unclear | 75.28 | 75.17 |
PGSC0003DMT400068829 | Potato | cytosol | 74.86 | 74.76 |
Solyc08g043170.2.1 | Tomato | plastid | 74.86 | 74.44 |
PGSC0003DMT400068827 | Potato | cytosol | 65.08 | 73.73 |
Bra005012.1-P | Field mustard | cytosol | 73.46 | 73.36 |
CDY20482 | Canola | cytosol | 73.32 | 73.22 |
CDX74830 | Canola | cytosol | 73.32 | 73.22 |
AT2G39800.1 | Thale cress | cytosol | 73.18 | 73.08 |
CDX93233 | Canola | cytosol | 72.91 | 72.8 |
CDY07034 | Canola | cytosol | 72.77 | 72.66 |
Bra000150.1-P | Field mustard | cytosol | 72.35 | 72.45 |
CDY07635 | Canola | cytosol | 72.35 | 72.45 |
CDX76082 | Canola | cytosol | 72.35 | 72.35 |
CDY61781 | Canola | cytosol | 72.21 | 72.31 |
Bra017051.1-P | Field mustard | cytosol | 72.35 | 72.25 |
Bra014732.1-P | Field mustard | cytosol | 72.49 | 72.18 |
AT3G55610.1 | Thale cress | cytosol | 72.77 | 71.76 |
CDY41203 | Canola | cytosol | 72.77 | 71.66 |
Bra007179.1-P | Field mustard | cytosol | 72.63 | 71.53 |
CDY40241 | Canola | cytosol | 72.63 | 71.53 |
CDY65768 | Canola | cytosol | 71.93 | 70.94 |
HORVU3Hr1G085760.5 | Barley | cytosol, plastid | 75.7 | 65.62 |
GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 25.7 | 61.74 |
Protein Annotations
Description
Delta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A287G756]
Coordinates
chrchr1H:-:498975383..498982941
Molecular Weight (calculated)
77532.4 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.040
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MASADPNRSF IKDVKRIIIK VGTAVITRND GRLALGRIGS LCEQVKDLNA QGYEVIMVTS GAVGVGRQRL RYRKLVNSSF ADLQKPQMEL DGKACAAVGQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFDN SNFRERLRET VESLLELRVI PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLALELKAD LLVLLSDVDG
201: LYSGPPSEPS SKLIHTYIKE KHYHEITFGD KSRVGRGGMT AKVQAAVWAS TGGVPVVITS GCASQSLVKV LRGEKIGTLF HKNASSWEPS KDASVREMAV
301: AARDCSRRLQ NLSSEERKKI LLDVADALEA NEDLIRSENE ADVAAAHEAG YESALVARLT LKPGKIASLA KSVRTLANME DPINEILKRT EVADGLVLEK
401: TSCPLGVLLI IFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNAILHK VITNAIPDNV GEKLIGLITT RDEIADLLKL DDVIDLVIPR GSNKLVAQIK
501: ASTKIPVLGH ADGVCHVYID KSADMDMAKR IVVDAKIDYP AACNAMETLL VHKDLMKTPE LDDILVALKT AGVNLYCGPV AHKILGYPKA DSLHLEYSSM
601: ACTVEIVDDV QSAIDHIHRY GSAHTDCVVT TDDTVAETFL RQVDSAAVLY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WLLRGKGQIV
701: NGDKDVVYTH KSLPLQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFDN SNFRERLRET VESLLELRVI PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLALELKAD LLVLLSDVDG
201: LYSGPPSEPS SKLIHTYIKE KHYHEITFGD KSRVGRGGMT AKVQAAVWAS TGGVPVVITS GCASQSLVKV LRGEKIGTLF HKNASSWEPS KDASVREMAV
301: AARDCSRRLQ NLSSEERKKI LLDVADALEA NEDLIRSENE ADVAAAHEAG YESALVARLT LKPGKIASLA KSVRTLANME DPINEILKRT EVADGLVLEK
401: TSCPLGVLLI IFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNAILHK VITNAIPDNV GEKLIGLITT RDEIADLLKL DDVIDLVIPR GSNKLVAQIK
501: ASTKIPVLGH ADGVCHVYID KSADMDMAKR IVVDAKIDYP AACNAMETLL VHKDLMKTPE LDDILVALKT AGVNLYCGPV AHKILGYPKA DSLHLEYSSM
601: ACTVEIVDDV QSAIDHIHRY GSAHTDCVVT TDDTVAETFL RQVDSAAVLY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WLLRGKGQIV
701: NGDKDVVYTH KSLPLQ
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.