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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
 mitochondrion: 26136264
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G281400.1
TraesCS1B01G290600.2
TraesCS1D01G280700.2
TraesCS3A01G363700.2
TraesCS3B01G395900.1
TraesCS3D01G357200.1
TraesCS7B01G254000.2
TraesCS7D01G155200.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 TraesCS1A01G281400.1 AT2G39800.1 21798944
AT2G39800.1 TraesCS1B01G290600.2 AT2G39800.1 21798944
AT2G39800.1 TraesCS1D01G280700.2 AT2G39800.1 21798944
AT2G39800.1 TraesCS3A01G363700.2 AT2G39800.1 21798944
AT2G39800.1 TraesCS3B01G395900.1 AT2G39800.1 21798944
AT2G39800.1 TraesCS3D01G357200.1 AT2G39800.1 21798944
AT2G39800.1 TraesCS7B01G254000.2 AT5G20010.1 21798944
AT2G39800.1 TraesCS7D01G155200.2 AT5G20010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G281400.1 Wheat cytosol 99.58 99.58
TraesCS1D01G280700.2 Wheat golgi 99.16 99.16
HORVU1Hr1G072780.1 Barley cytosol 97.77 97.77
Os05t0455500-02 Rice plasma membrane 87.99 87.99
KXG22139 Sorghum cytosol 86.87 86.87
Zm00001d038358_P002 Maize cytosol 82.82 81.34
GSMUA_Achr10P... Banana cytosol 13.55 80.83
Zm00001d010056_P002 Maize cytosol 85.75 79.95
VIT_13s0019g02360.t01 Wine grape cytosol 76.82 76.71
KRH73083 Soybean endoplasmic reticulum 76.26 76.58
KRH15055 Soybean nucleus 75.84 76.16
KRG97830 Soybean endoplasmic reticulum 75.28 75.38
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 74.86 74.76
TraesCS3B01G395900.1 Wheat cytosol 75.98 74.52
PGSC0003DMT400068829 Potato cytosol 74.44 74.34
Solyc08g043170.2.1 Tomato plastid 74.72 74.31
PGSC0003DMT400068827 Potato cytosol 64.66 73.26
Bra005012.1-P Field mustard cytosol 73.32 73.22
CDY20482 Canola cytosol 73.18 73.08
CDX74830 Canola cytosol 73.18 73.08
AT2G39800.1 Thale cress cytosol 72.91 72.8
CDX93233 Canola cytosol 72.77 72.66
CDY07034 Canola cytosol 72.63 72.52
CDX76082 Canola cytosol 72.49 72.49
Bra014732.1-P Field mustard cytosol 72.63 72.32
Bra000150.1-P Field mustard cytosol 72.21 72.31
CDY07635 Canola cytosol 72.21 72.31
CDY61781 Canola cytosol 72.07 72.17
Bra017051.1-P Field mustard cytosol 72.21 72.11
CDY41203 Canola cytosol 72.91 71.8
Bra007179.1-P Field mustard cytosol 72.77 71.66
CDY40241 Canola cytosol 72.77 71.66
AT3G55610.1 Thale cress cytosol 72.49 71.49
CDY65768 Canola cytosol 72.07 71.07
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 25.84 62.08
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinaseGO:GO:0003674GO:GO:0003824
GO:GO:0004349GO:GO:0004350GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006561GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016301
GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114InterPro:GPR_domInterPro:Glu/AcGlu_kinase
InterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163InterPro:IPR036393HAMAP:MF_00412
HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474
ScanProsite:PS00902PANTHER:PTHR11063PANTHER:PTHR11063:SF16SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407
TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092EnsemblPlantsGene:TraesCS1B01G290600EnsemblPlants:TraesCS1B01G290600.2TIGR:cd04256TIGR:cd07079
SEG:seg:::::
Description
No Description!
Coordinates
chr1B:-:507848286..507855621
Molecular Weight (calculated)
77704.7 Da
IEP (calculated)
6.564
GRAVY (calculated)
-0.073
Length
716 amino acids
Sequence
(BLAST)
001: MAGADPNRSF MKDVKRIIIK VGTAVITRND GRLALGRIGA LCEQVKDLNA QGYEVIMVTS GAVGVGRQRL RYRKLVNSSF ADLQKPQMEL DGKACAAVGQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFDN SNFRERLRET VESLLELRVI PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLALELKAD LLVLLSDVDG
201: LYSGPPSEPS SKLIHTYIKE KHYHEITFGD KSRVGRGGMT AKVQAAVWAS TGGVPVVITS GCASQSLVKV LRGEKIGTLF HKNASLWEPS KETSVREMAV
301: AARDCSRRLQ NLSSEERKKI LLDVADALEA NEDLIRSENE ADLAAAHEAG YESALVSRLT LKPGKIASLA KSVRTLANME DPINEILKRT EVADGLVLEK
401: TSCPLGVLLI IFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNAILHK VITNAIPDNV GEKLIGLITT RDEIADLLKH DDVIDLVIPR GSNKLVAQIK
501: SSTKIPVLGH ADGVCHVYID KSADMDMAKR IVMDAKIDYP AACNAMETLL VHKDLMKTPE LNDILVALKT AGVNLYCGPV AHKVLGYPKA DSLHLEYSSM
601: ACTVEIVDDV QSAIDHIHRY GSAHTDCVVT TDDKVAETFL RQVDSAAVLY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WLLRGKGQVV
701: NGDKDVEYTH KSLPLQ
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.