Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G349900.1 | Wheat | cytosol | 33.5 | 29.73 |
| AT5G20020.1 | Thale cress | cytosol | 28.93 | 25.79 |
| VIT_09s0002g05940.t01 | Wine grape | cytosol | 28.93 | 25.79 |
| VIT_04s0008g05020.t01 | Wine grape | cytosol | 28.93 | 25.79 |
| Solyc05g023800.2.1 | Tomato | nucleus | 28.93 | 25.79 |
| Solyc01g104700.2.1 | Tomato | cytosol, nucleus | 28.93 | 25.79 |
| Solyc01g104680.2.1 | Tomato | cytosol | 28.93 | 25.79 |
| PGSC0003DMT400076528 | Potato | cytosol | 28.93 | 25.79 |
| PGSC0003DMT400016576 | Potato | cytosol | 28.93 | 25.79 |
| Os01t0611100-01 | Rice | plastid | 28.93 | 25.79 |
| KRH61811 | Soybean | cytosol | 28.93 | 25.79 |
| KRH61808 | Soybean | nucleus | 28.93 | 25.79 |
| KRH52485 | Soybean | cytosol | 28.93 | 25.79 |
| KRH52484 | Soybean | cytosol | 28.93 | 25.79 |
| KRH52483 | Soybean | nucleus | 28.93 | 25.79 |
| AT5G20010.1 | Thale cress | cytosol | 28.93 | 25.79 |
| AT5G55190.1 | Thale cress | cytosol | 28.93 | 25.79 |
| Bra035562.1-P | Field mustard | cytosol, nucleus, plastid | 28.93 | 25.79 |
| Bra002926.1-P | Field mustard | cytosol, nucleus, plastid | 28.43 | 25.34 |
| EES01060 | Sorghum | cytosol | 27.92 | 25.0 |
| CDX70904 | Canola | extracellular | 29.95 | 24.89 |
| KRH56644 | Soybean | cytosol | 27.92 | 24.89 |
| CDY19907 | Canola | cytosol | 27.92 | 24.55 |
| GSMUA_Achr5P09850_001 | Banana | plasma membrane | 30.46 | 24.39 |
| GSMUA_Achr4P00780_001 | Banana | mitochondrion | 32.49 | 24.24 |
| VIT_11s0016g04780.t01 | Wine grape | plastid | 31.98 | 24.23 |
| CDY06600 | Canola | cytosol | 30.46 | 24.19 |
| GSMUA_Achr1P11790_001 | Banana | cytosol, golgi | 31.47 | 24.03 |
| GSMUA_Achr1P05300_001 | Banana | mitochondrion | 33.5 | 23.66 |
| CDY17309 | Canola | plastid | 29.95 | 22.78 |
| CDY20779 | Canola | vacuole | 28.93 | 22.44 |
| GSMUA_Achr5P06130_001 | Banana | cytosol | 29.44 | 22.14 |
| GSMUA_Achr6P01500_001 | Banana | vacuole | 27.92 | 21.83 |
| GSMUA_Achr1P14580_001 | Banana | cytosol | 30.96 | 21.48 |
| PGSC0003DMT400078306 | Potato | cytosol | 24.87 | 21.3 |
| AT5G55080.1 | Thale cress | cytosol | 23.86 | 21.17 |
| KRH61809 | Soybean | nucleus | 29.95 | 20.34 |
| VIT_04s0008g05030.t01 | Wine grape | cytosol | 29.95 | 19.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.32 | 18.58 |
| Solyc06g082720.1.1 | Tomato | golgi | 16.24 | 15.76 |
| GSMUA_Achr6P01550_001 | Banana | nucleus | 32.99 | 13.66 |
| CDY61737 | Canola | cytosol, mitochondrion, nucleus | 2.03 | 5.97 |
| VIT_18s0001g11670.t01 | Wine grape | endoplasmic reticulum, extracellular | 3.55 | 4.29 |
| Zm00001d011328_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0016787 |
| InterPro:IPR002041 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF5 |
| InterPro:Ran_GTPase | SUPFAM:SSF52540 | InterPro:Small_GTPase | EnsemblPlantsGene:TraesCS7D01G155200 | EnsemblPlants:TraesCS7D01G155200.2 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:103192514..103195316
Molecular Weight (calculated)
21648.7 Da
IEP (calculated)
10.646
GRAVY (calculated)
-0.570
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPTPYSSR PSPSWPNQPA HPAPFLLQES KAVPSDRGMR SAPAGNLLAL STGGAWRGRR SPSRSVARIL QRHPQHVEYT TTLDRLGLAD LSSPHSQTRA
101: AAMGIMPPPS PSSGQRRGND AMVLPNTPPV DYPTFKLILV GDGGTGKTTF VKRHVTGEFE KKYESTIGVE VRPLDFQTSH GKIRFYCWDI VREFGNW
101: AAMGIMPPPS PSSGQRRGND AMVLPNTPPV DYPTFKLILV GDGGTGKTTF VKRHVTGEFE KKYESTIGVE VRPLDFQTSH GKIRFYCWDI VREFGNW
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.