Factsheet for GSMUA_Achr1P11790_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0611100-01	Rice	plastid	81.78	95.48
Zm00001d044054_P002	Maize	cytosol	79.84	93.21
Zm00001d011474_P001	Maize	cytosol, plastid	79.84	93.21
KXG32999	Sorghum	cytosol	79.84	93.21
EES01060	Sorghum	cytosol	79.46	93.18
GSMUA_Achr5P09850_001	Banana	plasma membrane	85.66	89.84
Zm00001d011328_P001	Maize	cytosol	44.57	88.46
Zm00001d039091_P002	Maize	cytosol	79.84	87.29
GSMUA_Achr4P00780_001	Banana	mitochondrion	87.98	85.98
TraesCS7B01G254000.2	Wheat	cytosol	73.64	85.2
GSMUA_Achr6P01500_001	Banana	vacuole	82.56	84.52
KXG22580	Sorghum	cytosol, nucleus	30.62	83.16
GSMUA_Achr1P05300_001	Banana	mitochondrion	88.37	81.72
Zm00001d039090_P001	Maize	cytosol	79.84	81.42
GSMUA_Achr5P06130_001	Banana	cytosol	80.23	79.01
GSMUA_Achr1P14580_001	Banana	cytosol	86.43	78.52
GSMUA_AchrUn_...	Banana	cytosol	62.4	71.24
GSMUA_Achr6P01550_001	Banana	nucleus	87.21	47.27
TraesCS7D01G155200.2	Wheat	plastid	24.03	31.47

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0015031	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G11790_001
EnsemblPlants:GSMUA_Achr1P11790_001	EnsemblPlants:GSMUA_Achr1T11790_001	InterPro:IPR002041	UniProt:M0RZ38	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00627	PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF7	InterPro:Ran_GTPase	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0002964478	SEG:seg	:	:	:

Description

GTP-binding nuclear protein Ran-3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G11790_001]

Coordinates

chr1:+:8990253..8994224

Molecular Weight (calculated)

29336.2 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.350

Length

258 amino acids

Sequence
(BLAST)

001: MMKRSNGWER FALLLLHIRP LPPLDRTSPL FLSGSDLMAL PNQQTVDYPS FKLVLVGDGG TGKTTFVKRH LTGEFEKKYE PTIGVEVHPL DFFTNCGKIR
101: FYCWDTAGQE KFGGLRDGYY IHGQCAIIMF DVTARLTYKN VPTWHRDLCR VCENIPIVLC GNKVDVKNRQ VKAKQVTFHR KKNLQYYEIS AKSNYNFEKP
201: FLYLARKLAG DPNLHFVESP ALAPPEVQID LAAQQQHEAE LAAAAAQPLP DDDDDVFD

Best Arabidopsis Sequence Match ( AT5G55190.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E

Arabidopsis Description

RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.