Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0611100-01 | Rice | plastid | 93.85 | 55.2 |
| EES01060 | Sorghum | cytosol | 93.08 | 55.0 |
| Bra002926.1-P | Field mustard | cytosol, nucleus, plastid | 89.23 | 52.49 |
| Bra035562.1-P | Field mustard | cytosol, nucleus, plastid | 89.23 | 52.49 |
| AT5G55190.1 | Thale cress | cytosol | 88.46 | 52.04 |
| VIT_09s0002g05940.t01 | Wine grape | cytosol | 88.46 | 52.04 |
| VIT_04s0008g05020.t01 | Wine grape | cytosol | 88.46 | 52.04 |
| CDY19907 | Canola | cytosol | 89.23 | 51.79 |
| KRH52485 | Soybean | cytosol | 87.69 | 51.58 |
| Zm00001d044054_P002 | Maize | cytosol | 87.69 | 51.58 |
| Zm00001d011474_P001 | Maize | cytosol, plastid | 87.69 | 51.58 |
| KRH61811 | Soybean | cytosol | 87.69 | 51.58 |
| KRH61808 | Soybean | nucleus | 87.69 | 51.58 |
| KRH52484 | Soybean | cytosol | 87.69 | 51.58 |
| KRH52483 | Soybean | nucleus | 87.69 | 51.58 |
| AT5G20020.1 | Thale cress | cytosol | 86.92 | 51.13 |
| AT5G20010.1 | Thale cress | cytosol | 86.15 | 50.68 |
| Solyc05g023800.2.1 | Tomato | nucleus | 84.62 | 49.77 |
| Solyc01g104700.2.1 | Tomato | cytosol, nucleus | 84.62 | 49.77 |
| Solyc01g104680.2.1 | Tomato | cytosol | 84.62 | 49.77 |
| PGSC0003DMT400016576 | Potato | cytosol | 84.62 | 49.77 |
| PGSC0003DMT400076528 | Potato | cytosol | 83.85 | 49.32 |
| VIT_18s0001g11670.t01 | Wine grape | endoplasmic reticulum, extracellular | 61.54 | 49.08 |
| Zm00001d039091_P002 | Maize | cytosol | 88.46 | 48.73 |
| CDY61737 | Canola | cytosol, mitochondrion, nucleus | 24.62 | 47.76 |
| CDX70904 | Canola | extracellular | 85.38 | 46.84 |
| CDY06600 | Canola | cytosol | 89.23 | 46.77 |
| GSMUA_Achr5P09850_001 | Banana | plasma membrane | 88.46 | 46.75 |
| TraesCS7B01G254000.2 | Wheat | cytosol | 80.0 | 46.64 |
| KRH56644 | Soybean | cytosol | 78.46 | 46.15 |
| CDY20779 | Canola | vacuole | 89.23 | 45.67 |
| GSMUA_Achr6P01500_001 | Banana | vacuole | 88.46 | 45.63 |
| Zm00001d039090_P001 | Maize | cytosol | 88.46 | 45.45 |
| CDY17309 | Canola | plastid | 89.23 | 44.79 |
| GSMUA_Achr1P11790_001 | Banana | cytosol, golgi | 88.46 | 44.57 |
| VIT_11s0016g04780.t01 | Wine grape | plastid | 88.46 | 44.23 |
| GSMUA_Achr4P00780_001 | Banana | mitochondrion | 88.46 | 43.56 |
| GSMUA_Achr1P05300_001 | Banana | mitochondrion | 87.69 | 40.86 |
| GSMUA_Achr1P14580_001 | Banana | cytosol | 87.69 | 40.14 |
| KRH61809 | Soybean | nucleus | 87.69 | 39.31 |
| GSMUA_Achr5P06130_001 | Banana | cytosol | 78.46 | 38.93 |
| VIT_04s0008g05030.t01 | Wine grape | cytosol | 88.46 | 37.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.85 | 36.73 |
| PGSC0003DMT400078306 | Potato | cytosol | 60.77 | 34.35 |
| AT5G55080.1 | Thale cress | cytosol | 50.0 | 29.28 |
| Solyc06g082720.1.1 | Tomato | golgi | 39.23 | 25.12 |
| GSMUA_Achr6P01550_001 | Banana | nucleus | 87.69 | 23.95 |
| TraesCS7D01G155200.2 | Wheat | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | UniProt:A0A1D6FYZ5 | ProteinID:AQK96545.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016787 | InterPro:IPR002041 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00627 | PFscan:PS51418 |
| PANTHER:PTHR24071 | PANTHER:PTHR24071:SF8 | InterPro:Ran_GTPase | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTPase | UniParc:UPI0008437666 | EnsemblPlantsGene:Zm00001d011328 | EnsemblPlants:Zm00001d011328_P001 | EnsemblPlants:Zm00001d011328_T001 | SEG:seg |
Description
GTP-binding nuclear protein Ran-2
Coordinates
chr8:-:146855836..146859841
Molecular Weight (calculated)
14767.7 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.345
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDVTSRLTY KNVPTWHRDL CRVCENIPIV LCGNKVDVKN MQVKAKQVTF YRKKSLQYYE VSAKSNYNFE KPFLYLARKL AGDSNLHFVE TPALAPPDVT
101: IDMAAQQQHE AELAAAAAQP LLDDDDGMIE
101: IDMAAQQQHE AELAAAAAQP LLDDDDGMIE
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E
Arabidopsis Description
RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.