Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G55190.1 | Thale cress | cytosol | 64.86 | 65.16 |
| AT5G20020.1 | Thale cress | cytosol | 63.51 | 63.8 |
| Os01t0611100-01 | Rice | plastid | 63.51 | 63.8 |
| Zm00001d044054_P002 | Maize | cytosol | 63.06 | 63.35 |
| AT5G20010.1 | Thale cress | cytosol | 63.06 | 63.35 |
| Zm00001d011474_P001 | Maize | cytosol, plastid | 63.06 | 63.35 |
| KXG32999 | Sorghum | cytosol | 63.06 | 63.35 |
| EES01060 | Sorghum | cytosol | 61.26 | 61.82 |
| KRH56644 | Soybean | cytosol | 60.36 | 60.63 |
| Zm00001d039091_P002 | Maize | cytosol | 62.61 | 58.9 |
| TraesCS7B01G254000.2 | Wheat | cytosol | 59.01 | 58.74 |
| Zm00001d039090_P001 | Maize | cytosol | 62.61 | 54.94 |
| GSMUA_Achr5P06130_001 | Banana | cytosol | 62.61 | 53.05 |
| PGSC0003DMT400078306 | Potato | cytosol | 53.6 | 51.74 |
| Zm00001d011328_P001 | Maize | cytosol | 29.28 | 50.0 |
| KXG22580 | Sorghum | cytosol, nucleus | 18.02 | 42.11 |
| Solyc06g082720.1.1 | Tomato | golgi | 33.33 | 36.45 |
| TraesCS7D01G155200.2 | Wheat | plastid | 21.17 | 23.86 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | EntrezGene:835599 | ProteinID:AED96578.1 | ArrayExpress:AT5G55080 | EnsemblPlantsGene:AT5G55080 |
| RefSeq:AT5G55080 | TAIR:AT5G55080 | RefSeq:AT5G55080-TAIR-G | EnsemblPlants:AT5G55080.1 | TAIR:AT5G55080.1 | Unigene:At.55559 |
| Symbol:AtRAN4 | ProteinID:BAB08577.1 | GO:GO:0000054 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016787 | InterPro:IPR002041 | RefSeq:NP_200319.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PO:PO:0000037 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007103 | PO:PO:0007611 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PRINTS:PR00627 | PFscan:PS51418 |
| PANTHER:PTHR24071 | PANTHER:PTHR24071:SF7 | UniProt:Q9FLQ3 | InterPro:Ran_GTPase | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI00000A0B1B | : | : | : | : | : |
Description
RAN4GTP-binding nuclear protein Ran-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ3]
Coordinates
chr5:-:22351576..22353058
Molecular Weight (calculated)
25595.8 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.358
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPNQQNVD LPTFKLLIVG DGGTGKTTFL KRHLTGEFEH NTEPTLGVDI YPLDFFTNRG KIRFECWDTA GQEKYSGLKD AYYIHGQCAI IMFDVTARHT
101: YMNIDRWYRD LRRVCKNIPI VLCGNKVDVP SRQIKPKHVS YHRKKCLQYY EMSAKNNCNF EKPFLYLARR IAGDAKLSFV ESPEAQIDNL DVESLQLLTV
201: EAGTQPLLMT RISFEFNTLS IE
101: YMNIDRWYRD LRRVCKNIPI VLCGNKVDVP SRQIKPKHVS YHRKKCLQYY EMSAKNNCNF EKPFLYLARR IAGDAKLSFV ESPEAQIDNL DVESLQLLTV
201: EAGTQPLLMT RISFEFNTLS IE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.