Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G20010.1 | Thale cress | cytosol | 96.38 | 96.38 |
| AT5G55190.1 | Thale cress | cytosol | 96.38 | 96.38 |
| VIT_09s0002g05940.t01 | Wine grape | cytosol | 96.38 | 96.38 |
| Os01t0611100-01 | Rice | plastid | 94.57 | 94.57 |
| KXG32999 | Sorghum | cytosol | 92.76 | 92.76 |
| Zm00001d011474_P001 | Maize | cytosol, plastid | 92.76 | 92.76 |
| Zm00001d044054_P002 | Maize | cytosol | 92.76 | 92.76 |
| EES01060 | Sorghum | cytosol | 91.86 | 92.27 |
| Zm00001d011328_P001 | Maize | cytosol | 51.13 | 86.92 |
| Zm00001d039091_P002 | Maize | cytosol | 92.31 | 86.44 |
| TraesCS7B01G254000.2 | Wheat | cytosol | 84.16 | 83.41 |
| Zm00001d039090_P001 | Maize | cytosol | 92.31 | 80.63 |
| KXG22580 | Sorghum | cytosol, nucleus | 34.39 | 80.0 |
| VIT_04s0008g05030.t01 | Wine grape | cytosol | 95.93 | 69.51 |
| AT5G55080.1 | Thale cress | cytosol | 63.8 | 63.51 |
| TraesCS7D01G155200.2 | Wheat | plastid | 25.79 | 28.93 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | EntrezGene:832124 | UniProt:A0A178UQ77 | ProteinID:AED92780.1 | EMBL:AF296836 |
| EMBL:AF370337 | EMBL:AK226813 | ArrayExpress:AT5G20020 | EnsemblPlantsGene:AT5G20020 | RefSeq:AT5G20020 | TAIR:AT5G20020 |
| RefSeq:AT5G20020-TAIR-G | EnsemblPlants:AT5G20020.1 | TAIR:AT5G20020.1 | EMBL:AY062997 | EMBL:BT000424 | EMBL:BT000659 |
| EMBL:BT006264 | GO:GO:0000054 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006606 |
| GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016787 | GO:GO:0046686 |
| InterPro:IPR002041 | EMBL:L16790 | RefSeq:NP_197502.1 | ProteinID:OAO95630.1 | InterPro:P-loop_NTPase | UniProt:P41917 |
| PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0007131 | PO:PO:0020030 | PRINTS:PR00627 |
| PFscan:PS51418 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF7 | Symbol:RAN2 | InterPro:Ran_GTPase | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI0000001AE7 | EMBL:X97380 | SEG:seg | : | : |
Description
RAN2GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UQ77]
Coordinates
chr5:+:6762569..6764683
Molecular Weight (calculated)
25063.8 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.419
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ESPALAPPEV HLDIAAQQQN
201: EADLAAAAAQ PLPDDDDDAF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ESPALAPPEV HLDIAAQQQN
201: EADLAAAAAQ PLPDDDDDAF E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.