Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52483 | Soybean | nucleus | 99.09 | 99.09 |
| VIT_04s0008g05020.t01 | Wine grape | cytosol | 98.64 | 98.64 |
| Bra035562.1-P | Field mustard | cytosol, nucleus, plastid | 98.64 | 98.64 |
| KRH61808 | Soybean | nucleus | 98.64 | 98.64 |
| KRH61811 | Soybean | cytosol | 98.19 | 98.19 |
| KRH52484 | Soybean | cytosol | 98.19 | 98.19 |
| Bra002926.1-P | Field mustard | cytosol, nucleus, plastid | 97.74 | 97.74 |
| KRH52485 | Soybean | cytosol | 97.74 | 97.74 |
| CDY19907 | Canola | cytosol | 97.74 | 96.43 |
| AT5G20020.1 | Thale cress | cytosol | 96.38 | 96.38 |
| Solyc01g104700.2.1 | Tomato | cytosol, nucleus | 95.93 | 95.93 |
| Solyc01g104680.2.1 | Tomato | cytosol | 95.93 | 95.93 |
| Os01t0611100-01 | Rice | plastid | 95.93 | 95.93 |
| Solyc05g023800.2.1 | Tomato | nucleus | 95.48 | 95.48 |
| PGSC0003DMT400076528 | Potato | cytosol | 95.48 | 95.48 |
| PGSC0003DMT400016576 | Potato | cytosol | 95.48 | 95.48 |
| AT5G20010.1 | Thale cress | cytosol | 95.02 | 95.02 |
| HORVU0Hr1G030130.1 | Barley | cytosol | 93.21 | 94.93 |
| KXG32999 | Sorghum | cytosol | 93.67 | 93.67 |
| Zm00001d044054_P002 | Maize | cytosol | 93.67 | 93.67 |
| Zm00001d011474_P001 | Maize | cytosol, plastid | 93.67 | 93.67 |
| EES01060 | Sorghum | cytosol | 92.76 | 93.18 |
| Zm00001d011328_P001 | Maize | cytosol | 52.04 | 88.46 |
| CDY06600 | Canola | cytosol | 98.64 | 87.9 |
| Zm00001d039091_P002 | Maize | cytosol | 93.21 | 87.29 |
| CDY20779 | Canola | vacuole | 98.19 | 85.43 |
| TraesCS7B01G254000.2 | Wheat | cytosol | 84.62 | 83.86 |
| VIT_11s0016g04780.t01 | Wine grape | plastid | 98.64 | 83.85 |
| CDY17309 | Canola | plastid | 98.19 | 83.78 |
| KXG22580 | Sorghum | cytosol, nucleus | 35.29 | 82.11 |
| Zm00001d039090_P001 | Maize | cytosol | 93.21 | 81.42 |
| KRH61809 | Soybean | nucleus | 98.19 | 74.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.59 | 69.03 |
| AT5G55080.1 | Thale cress | cytosol | 65.16 | 64.86 |
| TraesCS7D01G155200.2 | Wheat | plastid | 25.79 | 28.93 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | EntrezGene:835612 | UniProt:A0A178UD71 | ProteinID:AED96598.1 | EMBL:AF017991 |
| ArrayExpress:AT5G55190 | EnsemblPlantsGene:AT5G55190 | RefSeq:AT5G55190 | TAIR:AT5G55190 | RefSeq:AT5G55190-TAIR-G | EnsemblPlants:AT5G55190.1 |
| TAIR:AT5G55190.1 | EMBL:AY042796 | EMBL:AY050317 | EMBL:AY116939 | ProteinID:BAB08588.1 | EMBL:BT000723 |
| GO:GO:0000054 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0015031 | GO:GO:0016787 | InterPro:IPR002041 | RefSeq:NP_200330.1 | ProteinID:OAO91826.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00627 | PFscan:PS51418 |
| PANTHER:PTHR24071 | PANTHER:PTHR24071:SF7 | UniProt:Q8H156 | Symbol:RAN3 | InterPro:Ran_GTPase | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | EMBL:U73810 | EMBL:U75601 | UniParc:UPI00000A3602 | EMBL:X97381 | SEG:seg |
Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
Coordinates
chr5:+:22392063..22394185
Molecular Weight (calculated)
25080.8 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.419
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.