Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0611100-01 | Rice | plastid | 95.91 | 95.48 |
| VIT_09s0002g05940.t01 | Wine grape | cytosol | 93.64 | 93.21 |
| Zm00001d011328_P001 | Maize | cytosol | 55.0 | 93.08 |
| AT5G55190.1 | Thale cress | cytosol | 93.18 | 92.76 |
| Bra035562.1-P | Field mustard | cytosol, nucleus, plastid | 93.18 | 92.76 |
| VIT_04s0008g05020.t01 | Wine grape | cytosol | 93.18 | 92.76 |
| Bra002926.1-P | Field mustard | cytosol, nucleus, plastid | 92.73 | 92.31 |
| KRH61808 | Soybean | nucleus | 92.73 | 92.31 |
| KRH52483 | Soybean | nucleus | 92.73 | 92.31 |
| KRH52485 | Soybean | cytosol | 92.27 | 91.86 |
| KXG32999 | Sorghum | cytosol | 92.27 | 91.86 |
| KRH61811 | Soybean | cytosol | 92.27 | 91.86 |
| KRH52484 | Soybean | cytosol | 92.27 | 91.86 |
| AT5G20020.1 | Thale cress | cytosol | 92.27 | 91.86 |
| CDY19907 | Canola | cytosol | 92.27 | 90.62 |
| AT5G20010.1 | Thale cress | cytosol | 90.91 | 90.5 |
| Solyc05g023800.2.1 | Tomato | nucleus | 90.45 | 90.05 |
| Solyc01g104700.2.1 | Tomato | cytosol, nucleus | 90.45 | 90.05 |
| Solyc01g104680.2.1 | Tomato | cytosol | 90.45 | 90.05 |
| PGSC0003DMT400016576 | Potato | cytosol | 90.45 | 90.05 |
| PGSC0003DMT400076528 | Potato | cytosol | 90.0 | 89.59 |
| KRH56644 | Soybean | cytosol | 85.91 | 85.52 |
| CDX70904 | Canola | extracellular | 90.91 | 84.39 |
| GSMUA_Achr5P09850_001 | Banana | plasma membrane | 93.18 | 83.33 |
| CDY06600 | Canola | cytosol | 93.18 | 82.66 |
| KXG22580 | Sorghum | cytosol, nucleus | 35.45 | 82.11 |
| CDY20779 | Canola | vacuole | 92.73 | 80.31 |
| GSMUA_Achr1P11790_001 | Banana | cytosol, golgi | 93.18 | 79.46 |
| GSMUA_Achr6P01500_001 | Banana | vacuole | 90.91 | 79.37 |
| VIT_11s0016g04780.t01 | Wine grape | plastid | 93.18 | 78.85 |
| CDY17309 | Canola | plastid | 92.73 | 78.76 |
| EER88605 | Sorghum | cytosol | 79.09 | 78.73 |
| GSMUA_Achr4P00780_001 | Banana | mitochondrion | 93.18 | 77.65 |
| GSMUA_Achr5P06130_001 | Banana | cytosol | 88.18 | 74.05 |
| GSMUA_Achr1P05300_001 | Banana | mitochondrion | 92.73 | 73.12 |
| GSMUA_Achr1P14580_001 | Banana | cytosol | 92.27 | 71.48 |
| KRH61809 | Soybean | nucleus | 92.27 | 70.0 |
| VIT_04s0008g05030.t01 | Wine grape | cytosol | 93.18 | 67.21 |
| PGSC0003DMT400078306 | Potato | cytosol | 69.09 | 66.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.82 | 65.04 |
| VIT_18s0001g11670.t01 | Wine grape | endoplasmic reticulum, extracellular | 47.73 | 64.42 |
| KXG20307 | Sorghum | cytosol | 31.82 | 63.64 |
| AT5G55080.1 | Thale cress | cytosol | 61.82 | 61.26 |
| CDY61737 | Canola | cytosol, mitochondrion, nucleus | 17.27 | 56.72 |
| OQU76666 | Sorghum | cytosol | 50.0 | 53.92 |
| Solyc06g082720.1.1 | Tomato | golgi | 45.45 | 49.26 |
| GSMUA_Achr6P01550_001 | Banana | nucleus | 93.18 | 43.07 |
| TraesCS7D01G155200.2 | Wheat | plastid | 25.0 | 27.92 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | EntrezGene:8084813 | UniProt:C5XQZ2 | EnsemblPlants:EES01060 | ProteinID:EES01060 |
| ProteinID:EES01060.1 | GO:GO:0000054 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016787 | InterPro:IPR002041 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00627 | PFscan:PS51418 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF8 | InterPro:Ran_GTPase |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | EnsemblPlantsGene:SORBI_3003G217800 | SUPFAM:SSF52540 |
| unigene:Sbi.19383 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0001A84A77 | RefSeq:XP_002455940.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:55322628..55325591
Molecular Weight (calculated)
24894.8 Da
IEP (calculated)
7.466
GRAVY (calculated)
-0.375
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPNQQTVN YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFHTNCG MIRFYCWDTA GQEKFGGLRD GYYIHGQCGI IMFDVTSRLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKSLQYY EVSAKSNYNF EKPFLYLARK LAGDCNLRFV ESPALAPPDV TIDMAAQQQH
201: EAELAAAAAQ PLPDDDDDLI
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKSLQYY EVSAKSNYNF EKPFLYLARK LAGDCNLRFV ESPALAPPDV TIDMAAQQQH
201: EAELAAAAAQ PLPDDDDDLI
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.