Factsheet for GSMUA_Achr6P01500_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0611100-01	Rice	plastid	82.14	93.67
Zm00001d044054_P002	Maize	cytosol	80.56	91.86
Zm00001d011474_P001	Maize	cytosol, plastid	80.56	91.86
KXG32999	Sorghum	cytosol	80.56	91.86
EES01060	Sorghum	cytosol	79.37	90.91
Zm00001d011328_P001	Maize	cytosol	45.63	88.46
GSMUA_Achr5P09850_001	Banana	plasma membrane	85.32	87.4
Zm00001d039091_P002	Maize	cytosol	79.76	85.17
KXG22580	Sorghum	cytosol, nucleus	31.75	84.21
TraesCS7B01G254000.2	Wheat	cytosol	73.41	82.96
GSMUA_Achr1P11790_001	Banana	cytosol, golgi	84.52	82.56
GSMUA_Achr4P00780_001	Banana	mitochondrion	84.52	80.68
Zm00001d039090_P001	Maize	cytosol	79.76	79.45
GSMUA_Achr1P05300_001	Banana	mitochondrion	84.52	76.34
GSMUA_Achr5P06130_001	Banana	cytosol	77.78	74.81
GSMUA_Achr1P14580_001	Banana	cytosol	84.13	74.65
GSMUA_AchrUn_...	Banana	cytosol	61.51	68.58
GSMUA_Achr6P01550_001	Banana	nucleus	86.11	45.59
TraesCS7D01G155200.2	Wheat	plastid	21.83	27.92

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0015031	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G01500_001
EnsemblPlants:GSMUA_Achr6P01500_001	EnsemblPlants:GSMUA_Achr6T01500_001	InterPro:IPR002041	UniProt:M0T398	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00627	PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF7	InterPro:Ran_GTPase	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI000296C9AE	SEG:seg	:	:	:

Description

GTP-binding nuclear protein Ran-3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01500_001]

Coordinates

chr6:-:987524..990480

Molecular Weight (calculated)

28431.9 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.217

Length

252 amino acids

Sequence
(BLAST)

001: MVGFRSVSSV ILLLAADWGV YVCISDLCYH LQALSNQQTV DFPSFKLVLV GDGGTGKTTF VKRHLTGEFE KKYEPTIGVE VHPLDFFTNC GKIRFNCWDT
101: AGQEKFGGLR DGYYINGQCA IIMFDVTARL TYKNVPTWHR DLCRVCENVP IVLCGNKVDV KNRQVKAKQV TFHRKKNLQY YEISAKSNYN FEKPFLYLAR
201: KLAGDQNLHF VESPALAPPE VQIDLAAQQQ HEAELAAAAA QPLPDDDDDL FE

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.