Factsheet for GSMUA_Achr5P06130_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0611100-01	Rice	plastid	75.57	89.59
Zm00001d044054_P002	Maize	cytosol	75.19	89.14
Zm00001d011474_P001	Maize	cytosol, plastid	75.19	89.14
KXG32999	Sorghum	cytosol	75.19	89.14
EES01060	Sorghum	cytosol	74.05	88.18
KRH56644	Soybean	cytosol	73.28	86.88
TraesCS7B01G254000.2	Wheat	cytosol	72.14	84.75
Zm00001d039091_P002	Maize	cytosol	75.19	83.47
GSMUA_Achr5P09850_001	Banana	plasma membrane	77.86	82.93
GSMUA_Achr4P00780_001	Banana	mitochondrion	80.92	80.3
GSMUA_Achr1P11790_001	Banana	cytosol, golgi	79.01	80.23
Zm00001d011328_P001	Maize	cytosol	38.93	78.46
Zm00001d039090_P001	Maize	cytosol	75.19	77.87
GSMUA_Achr6P01500_001	Banana	vacuole	74.81	77.78
GSMUA_Achr1P05300_001	Banana	mitochondrion	78.63	73.84
KXG22580	Sorghum	cytosol, nucleus	26.34	72.63
GSMUA_Achr1P14580_001	Banana	cytosol	77.86	71.83
PGSC0003DMT400078306	Potato	cytosol	61.07	69.57
GSMUA_AchrUn_...	Banana	cytosol	58.4	67.7
AT5G55080.1	Thale cress	cytosol	53.05	62.61
Solyc06g082720.1.1	Tomato	golgi	39.69	51.23
GSMUA_Achr6P01550_001	Banana	nucleus	77.86	42.86
TraesCS7D01G155200.2	Wheat	plastid	22.14	29.44

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0015031	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G06130_001
EnsemblPlants:GSMUA_Achr5P06130_001	EnsemblPlants:GSMUA_Achr5T06130_001	InterPro:IPR002041	UniProt:M0SW42	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00627	PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF7	InterPro:Ran_GTPase	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0002964B82	SEG:seg	:	:	:

Description

GTP-binding nuclear protein Ran-3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G06130_001]

Coordinates

chr5:-:4542906..4544952

Molecular Weight (calculated)

29672.5 Da

IEP (calculated)

7.603

GRAVY (calculated)

-0.310

Length

262 amino acids

Sequence
(BLAST)

001: MESNGHQRRV SLKPTPPVPG TVASVFVIED TKRSFHSFLP HMALPNQQTV DYPSFKLVIV GDGGTGKTTF VKRHLTGEFE KKYEPTIGVE VHPLDFHTNC
101: GKIRFYCWDT AGQEKFGGLR DGYYIHGQCA IIMFDVTARL TYKNVPTWHR DLCRVCENIP IVLCGNKVDV KNRQVKAKMV TFHRKKNFQY YEISAKSNYN
201: FEKPFLYLAR KLSGDLSLHF VESPALAPPE VHIDLAAQLY FEADIAAAAA LPLPDDEDDA FD

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.