Factsheet for GSMUA_Achr6P01550_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0611100-01	Rice	plastid	44.33	95.48
Zm00001d044054_P002	Maize	cytosol	43.49	93.67
Zm00001d011474_P001	Maize	cytosol, plastid	43.49	93.67
KXG32999	Sorghum	cytosol	43.49	93.67
EES01060	Sorghum	cytosol	43.07	93.18
GSMUA_Achr5P09850_001	Banana	plasma membrane	46.01	89.02
Zm00001d011328_P001	Maize	cytosol	23.95	87.69
GSMUA_Achr1P11790_001	Banana	cytosol, golgi	47.27	87.21
Zm00001d039091_P002	Maize	cytosol	43.07	86.86
GSMUA_Achr6P01500_001	Banana	vacuole	45.59	86.11
TraesCS7B01G254000.2	Wheat	cytosol	39.5	84.3
GSMUA_Achr4P00780_001	Banana	mitochondrion	46.43	83.71
KXG22580	Sorghum	cytosol, nucleus	16.39	82.11
Zm00001d039090_P001	Maize	cytosol	43.07	81.03
GSMUA_Achr1P05300_001	Banana	mitochondrion	46.85	79.93
GSMUA_Achr5P06130_001	Banana	cytosol	42.86	77.86
GSMUA_Achr1P14580_001	Banana	cytosol	45.8	76.76
GSMUA_AchrUn_...	Banana	cytosol	33.19	69.91
TraesCS7D01G155200.2	Wheat	plastid	13.66	32.99

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0015031	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G01550_001
EnsemblPlants:GSMUA_Achr6P01550_001	EnsemblPlants:GSMUA_Achr6T01550_001	InterPro:IPR002041	UniProt:M0T3A3	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00627	PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF7	InterPro:Ran_GTPase	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0002957546	SEG:seg	:	:	:

Description

GTP-binding nuclear protein Ran-3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01550_001]

Coordinates

chr6:-:1009700..1014924

Molecular Weight (calculated)

54106.8 Da

IEP (calculated)

8.243

GRAVY (calculated)

-0.718

Length

476 amino acids

Sequence
(BLAST)

001: MSFLQEIGID LTDVRRSPTE GDDLPWRGHR SSYSDINLPD DITIDPQPEE QLDTEEEAGE ETNNPRESKS ISSEEEKPEG CERDFSDAAQ QKEEETSIPS
101: ELILRRINSK KGLTSCQLGK QLSFKWATGT GPRIACVRDY PSELQCRALE QVNLSPRTAA TSRFASPRTT ASQSPKMKEK TRRGGRTSLG LNTYSSKRRD
201: QRIRRPRESR SNEAEWGGKR KSVNRLGFGV AVEIYIRPFS TFRFRSRTSP FRSVLMALPN QQTVDYPSFK LVLVGDGGTG KTTFVKRHLT GEFEKKYEPT
301: IGVEVHPLDF FTNCGKIRFY CWDTAGQEKF GGLRDGYYIH GQCAIIMFDV TARLTYKNVP TWHRDLCRVC ENIPIVLCGN KVDVKNRQVK AKQVTFHRKK
401: NLQYYEISAK SNYNFEKPFL YLARKLAGDQ NLHFVESPAL APPEVQIDLV AQQQHEAELA AAAAQPLPDD DDDLFI

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.