Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20307 | Sorghum | cytosol | 66.32 | 57.27 |
| CDY61737 | Canola | cytosol, mitochondrion, nucleus | 32.63 | 46.27 |
| KXG32999 | Sorghum | cytosol | 90.53 | 38.91 |
| Zm00001d039091_P002 | Maize | cytosol | 92.63 | 37.29 |
| Bra035562.1-P | Field mustard | cytosol, nucleus, plastid | 84.21 | 36.2 |
| Bra002926.1-P | Field mustard | cytosol, nucleus, plastid | 83.16 | 35.75 |
| VIT_04s0008g05020.t01 | Wine grape | cytosol | 83.16 | 35.75 |
| CDY19907 | Canola | cytosol | 84.21 | 35.71 |
| EES01060 | Sorghum | cytosol | 82.11 | 35.45 |
| VIT_09s0002g05940.t01 | Wine grape | cytosol | 82.11 | 35.29 |
| AT5G55190.1 | Thale cress | cytosol | 82.11 | 35.29 |
| KRH61811 | Soybean | cytosol | 82.11 | 35.29 |
| KRH52485 | Soybean | cytosol | 82.11 | 35.29 |
| KRH52484 | Soybean | cytosol | 82.11 | 35.29 |
| KRH52483 | Soybean | nucleus | 81.05 | 34.84 |
| KRH61808 | Soybean | nucleus | 81.05 | 34.84 |
| Zm00001d039090_P001 | Maize | cytosol | 92.63 | 34.78 |
| AT5G20020.1 | Thale cress | cytosol | 80.0 | 34.39 |
| AT5G20010.1 | Thale cress | cytosol | 78.95 | 33.94 |
| Solyc05g023800.2.1 | Tomato | nucleus | 77.89 | 33.48 |
| Solyc01g104700.2.1 | Tomato | cytosol, nucleus | 77.89 | 33.48 |
| Solyc01g104680.2.1 | Tomato | cytosol | 77.89 | 33.48 |
| PGSC0003DMT400016576 | Potato | cytosol | 77.89 | 33.48 |
| HORVU1Hr1G090760.2 | Barley | plastid | 89.47 | 33.46 |
| PGSC0003DMT400076528 | Potato | cytosol | 76.84 | 33.03 |
| KRH56644 | Soybean | cytosol | 76.84 | 33.03 |
| CDY06600 | Canola | cytosol | 84.21 | 32.26 |
| GSMUA_Achr5P09850_001 | Banana | plasma membrane | 83.16 | 32.11 |
| VIT_18s0001g11670.t01 | Wine grape | endoplasmic reticulum, extracellular | 54.74 | 31.9 |
| GSMUA_Achr6P01500_001 | Banana | vacuole | 84.21 | 31.75 |
| CDX70904 | Canola | extracellular | 78.95 | 31.65 |
| CDY20779 | Canola | vacuole | 84.21 | 31.5 |
| CDY17309 | Canola | plastid | 84.21 | 30.89 |
| GSMUA_Achr1P11790_001 | Banana | cytosol, golgi | 83.16 | 30.62 |
| VIT_11s0016g04780.t01 | Wine grape | plastid | 83.16 | 30.38 |
| GSMUA_Achr4P00780_001 | Banana | mitochondrion | 83.16 | 29.92 |
| EER88605 | Sorghum | cytosol | 68.42 | 29.41 |
| GSMUA_Achr1P05300_001 | Banana | mitochondrion | 83.16 | 28.32 |
| OQU76666 | Sorghum | cytosol | 60.0 | 27.94 |
| GSMUA_Achr1P14580_001 | Banana | cytosol | 82.11 | 27.46 |
| KRH61809 | Soybean | nucleus | 82.11 | 26.9 |
| GSMUA_Achr5P06130_001 | Banana | cytosol | 72.63 | 26.34 |
| VIT_04s0008g05030.t01 | Wine grape | cytosol | 82.11 | 25.57 |
| Solyc06g082720.1.1 | Tomato | golgi | 52.63 | 24.63 |
| PGSC0003DMT400078306 | Potato | cytosol | 56.84 | 23.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.79 | 23.45 |
| AT5G55080.1 | Thale cress | cytosol | 42.11 | 18.02 |
| GSMUA_Achr6P01550_001 | Banana | nucleus | 82.11 | 16.39 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1B6PA34 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR002041 | EnsemblPlants:KXG22580 | ProteinID:KXG22580 | ProteinID:KXG22580.1 |
| PRINTS:PR00627 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF8 | InterPro:Ran_GTPase | SMART:SM00176 | EnsemblPlantsGene:SORBI_3009G240400 |
| UniParc:UPI00081ABDA2 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:57788800..57789692
Molecular Weight (calculated)
10848.8 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.729
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: VDVKNRQVKA KQVTFHRKKN QQYYEISTKS NHNFEKPFLY LARKVAGDPN LHFVEAVALK PPEVTIDMAT QQQHEGELAA AAAQPLPDDD DYLIE
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E
Arabidopsis Description
RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.