Factsheet for HORVU1Hr1G090760.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22580	Sorghum	cytosol, nucleus	33.46	89.47
Zm00001d039091_P002	Maize	cytosol	76.77	82.63
HORVU0Hr1G030130.1	Barley	cytosol	68.11	79.72
Zm00001d039090_P001	Maize	cytosol	76.77	77.08
HORVU7Hr1G084420.4	Barley	cytosol	67.72	59.52

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	UniProt:A0A287GPD6	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0015031	GO:GO:0016787
EnsemblPlantsGene:HORVU1Hr1G090760	EnsemblPlants:HORVU1Hr1G090760.2	InterPro:IPR002041	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00627
PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF8	InterPro:Ran_GTPase	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI000B4715DD	SEG:seg	:	:	:	:

Description

GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A287GPD6]

Coordinates

chrchr1H:-:546901917..546904759

Molecular Weight (calculated)

29117.6 Da

IEP (calculated)

9.169

GRAVY (calculated)

-0.679

Length

254 amino acids

Sequence
(BLAST)

001: SPNSDSKYSS SSPPARVLLP PSRAAASQPR PPHGAAEPEH RRLPQLQARH RRRRRDWCKT TFVKRHLTGE FEKKYEPTIG VEVHPLDFTT NCGKIRFYCW
101: DTAGQEKFGG LRDGYYIHGQ CAIIMFDVTS RLTYKNVPTW HRDLCRVCEN IPIVLCGNKV DVKNRQVKAK QVTFHRKKNL QYYEISAKSN YNFEKPFLYL
201: ARKLAGDPNI HFVEAVALKP PEVTFDLAMQ QQHEAELAAA AAQPLPDDDD DLIE

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.