Factsheet for HORVU7Hr1G084420.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G349900.1	Wheat	cytosol	74.05	96.4
TraesCS7B01G254000.2	Wheat	cytosol	73.7	95.52
EER88605	Sorghum	cytosol	66.09	86.43
HORVU0Hr1G030130.1	Barley	cytosol	61.59	82.03
KXG20307	Sorghum	cytosol	26.99	70.91
HORVU1Hr1G090760.2	Barley	plastid	59.52	67.72
OQU76666	Sorghum	cytosol	40.48	57.35

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	UniProt:A0A287X584	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0015031	GO:GO:0016787
EnsemblPlantsGene:HORVU7Hr1G084420	EnsemblPlants:HORVU7Hr1G084420.4	InterPro:IPR002041	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00627
PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF5	InterPro:Ran_GTPase	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI000B478CD0	SEG:seg	:	:	:	:

Description

GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A287X584]

Coordinates

chrchr7H:-:508668430..508670848

Molecular Weight (calculated)

32292.6 Da

IEP (calculated)

9.311

GRAVY (calculated)

-0.494

Length

289 amino acids

Sequence
(BLAST)

001: HRQPRLAGGS LGSKRTTPYI YRGRGGPSPS SVDTRPRIAA ETHRSRSPPR RSAPTPARVP APEVSAEMAL PNTQPVDCPN FKLVLVGDGG TGKTTFVKRH
101: VTGEFEKKYE PTIGVEVRPL DFQTSHGKIR FSCWDTAGQE KFGGLRDGYY IHGQCAIIMF DVTSRLTYKN VPTWHRDICR VCENIPIVLC GNKVDVKNRQ
201: VKAKMVTFHR KKNLQYYEIS AKSNYNFEKP FLYLARKLSG DMTLRFVEET ALLPADVTID LVAQQQIDAE IAAAAALPLP DDDDDNIMD

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.