CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20307	Sorghum	cytosol	36.76	68.18
EER88605	Sorghum	cytosol	65.69	60.63
KXG22580	Sorghum	cytosol, nucleus	27.94	60.0
TraesCS7D01G349900.1	Wheat	cytosol	57.35	52.7
TraesCS7B01G254000.2	Wheat	cytosol	57.35	52.47
KXG32999	Sorghum	cytosol	54.41	50.23
EES01060	Sorghum	cytosol	53.92	50.0
HORVU7Hr1G084420.4	Barley	cytosol	57.35	40.48

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	UniProt:A0A1W0VTS3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0016787	InterPro:IPR002041	EnsemblPlants:OQU76666
ProteinID:OQU76666	ProteinID:OQU76666.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00627	PFscan:PS51418
PANTHER:PTHR24071	PANTHER:PTHR24071:SF5	InterPro:Ran_GTPase	SMART:SM00173	SMART:SM00175	SMART:SM00176
EnsemblPlantsGene:SORBI_3010G182500	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0009DC87E0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:52211390..52214837

Molecular Weight (calculated)

22793.4 Da

IEP (calculated)

7.549

GRAVY (calculated)

-0.084

Length

204 amino acids

Sequence
(BLAST)

001: MAADQICQSE RGKVEVVGSW LVGNWGSSQW CQSFSVHLAS HHSCSTSCCC CRGKEEDGSA LTFSSCLPVF SCYINGQCAI IMFDVTSRIT YKNVPTWHRD
101: ISRVCENIPV VLCGNKVDVK NRQVKAKAVT CHRKKNLQYY EISAKSNYNF EKPFLYLARK LAENMDVKFV EELALVPVDV TMDVAAQQQI DKEIELAVAI
201: PPVG

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.