Factsheet for TraesCS7D01G349900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G254000.2	Wheat	cytosol	99.55	99.1
EER88605	Sorghum	cytosol	86.94	87.33
HORVU7Hr1G084420.4	Barley	cytosol	96.4	74.05
KXG20307	Sorghum	cytosol	34.68	70.0
OQU76666	Sorghum	cytosol	52.7	57.35
TraesCS7D01G155200.2	Wheat	plastid	29.73	33.5

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0016787
InterPro:IPR002041	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00627	PFscan:PS51418	PANTHER:PTHR24071
PANTHER:PTHR24071:SF5	InterPro:Ran_GTPase	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS7D01G349900	EnsemblPlants:TraesCS7D01G349900.1
TIGR:cd00877	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:449774035..449776158

Molecular Weight (calculated)

25179.2 Da

IEP (calculated)

7.016

GRAVY (calculated)

-0.332

Length

222 amino acids

Sequence
(BLAST)

001: MALPNTPPVD YPSFKLVLVG DGGTGKTTFV KRHVTGEFEK KYEPTIGVEV RPLDFQTSHG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTSRLT
101: YKNVPTWHRD ICRVCENIPI VLCGNKVDVK NRQVKAKMVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LSGDMTLRFV EETALLPADV TVDLAAQQQI
201: EAEIAAAAAM PLPDDDDDNI MD

Best Arabidopsis Sequence Match ( AT5G55190.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E

Arabidopsis Description

RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.