Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22580 | Sorghum | cytosol, nucleus | 57.27 | 66.32 |
| EER88605 | Sorghum | cytosol | 83.64 | 41.63 |
| OQU76666 | Sorghum | cytosol | 68.18 | 36.76 |
| TraesCS7D01G349900.1 | Wheat | cytosol | 70.0 | 34.68 |
| TraesCS7B01G254000.2 | Wheat | cytosol | 70.0 | 34.53 |
| EES01060 | Sorghum | cytosol | 63.64 | 31.82 |
| KXG32999 | Sorghum | cytosol | 63.64 | 31.67 |
| HORVU7Hr1G084420.4 | Barley | cytosol | 70.91 | 26.99 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A194YK30 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR002041 | EnsemblPlants:KXG20307 | ProteinID:KXG20307 | ProteinID:KXG20307.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00627 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF5 | InterPro:Ran_GTPase |
| SMART:SM00176 | EnsemblPlantsGene:SORBI_3010G182900 | SUPFAM:SSF52540 | InterPro:Small_GTPase | UniParc:UPI0007F1B07B | : |
Description
hypothetical protein
Coordinates
chr10:-:52244471..52245210
Molecular Weight (calculated)
12431.8 Da
IEP (calculated)
4.879
GRAVY (calculated)
-0.434
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEHPGCPVL LCGNNVDVKN QQVKAKSVTY HRKKNLQYYE ISTKSNYNFE KPFLYLARKI AGNMDLKFVE EIALVSADVT INIAAQQKID KEIELAAAIP
101: LPDEDDDNMD
101: LPDEDDDNMD
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.