CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01060
KXG22580
KXG32999

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07140.1	EES01060	AT5G20010.1	9025305
AT1G07140.1	KXG22580	AT5G20010.1	9025305
AT1G07140.1	KXG32999	AT5G20010.1	9025305
AT1G07140.1	EES01060	AT5G20020.1	9025305
AT1G07140.1	KXG22580	AT5G20020.1	9025305
AT1G07140.1	KXG32999	AT5G20020.1	9025305
AT1G07140.1	EES01060	AT5G55190.1	21798944
AT1G07140.1	KXG22580	AT5G55190.1	21798944
AT1G07140.1	KXG32999	AT5G55190.1	21798944
AT1G07140.1	EES01060	AT5G55190.1	9025305
AT1G07140.1	KXG22580	AT5G55190.1	9025305
AT1G07140.1	KXG32999	AT5G55190.1	9025305
AT2G30060.1	EES01060	AT5G20010.1	9025305
AT2G30060.1	KXG22580	AT5G20010.1	9025305
AT2G30060.1	KXG32999	AT5G20010.1	9025305
AT2G30060.1	EES01060	AT5G20020.1	9025305
AT2G30060.1	KXG22580	AT5G20020.1	9025305
AT2G30060.1	KXG32999	AT5G20020.1	9025305
AT2G30060.1	EES01060	AT5G55190.1	9025305
AT2G30060.1	KXG22580	AT5G55190.1	9025305
AT2G30060.1	KXG32999	AT5G55190.1	9025305

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010504_P001	Maize	extracellular	92.31	92.31
Os05t0350600-01	Rice	cytosol, plasma membrane, plastid	81.45	81.82
TraesCS1D01G225400.1	Wheat	cytosol	81.9	81.53
TraesCS1B01G237100.1	Wheat	cytosol	81.9	81.53
TraesCS1A01G223800.1	Wheat	cytosol	81.9	81.53
HORVU1Hr1G059970.2	Barley	cytosol	76.02	76.71
Zm00001d037993_P001	Maize	cytosol	90.05	72.1
EER92413	Sorghum	cytosol	67.87	71.77
GSMUA_Achr9P04480_001	Banana	cytosol	67.87	67.87
CDX86501	Canola	cytosol	11.76	60.47
AT2G30060.1	Thale cress	cytosol	58.82	59.91
VIT_04s0008g01410.t01	Wine grape	cytosol	58.82	59.09
CDY24034	Canola	cytosol	57.01	58.6
CDY15604	Canola	cytosol	59.28	58.48
CDY06679	Canola	cytosol	57.47	57.73
Bra015554.1-P	Field mustard	cytosol	57.47	57.73
KRH75945	Soybean	cytosol	59.73	57.64
CDX86496	Canola	cytosol	58.37	57.59
CDX84862	Canola	cytosol	57.47	57.47
AT1G07140.1	Thale cress	cytosol	59.28	57.46
CDY09935	Canola	cytosol	58.37	57.33
Bra030675.1-P	Field mustard	cytosol	57.92	57.14
Bra022775.1-P	Field mustard	cytosol	57.01	57.01
CDY59068	Canola	cytosol	57.92	56.89
KRH35051	Soybean	endoplasmic reticulum	56.11	56.88
KRH65697	Soybean	cytosol	50.68	56.28
PGSC0003DMT400021160	Potato	cytosol	57.01	56.25
Solyc08g062660.2.1	Tomato	nucleus, plastid	57.01	56.25
Bra031555.1-P	Field mustard	cytosol	57.92	56.14
AT5G58590.1	Thale cress	cytosol	55.2	55.71
KRG91719	Soybean	endoplasmic reticulum	55.2	54.71
CDX80354	Canola	cytosol	19.91	49.44
CDY10250	Canola	plastid	51.13	45.94

Protein Annotations

Gene3D:2.30.29.30	MapMan:23.5.1.6	EntrezGene:8083752	UniProt:C5YWC4	EnsemblPlants:EES19356	ProteinID:EES19356
ProteinID:EES19356.1	GO:GO:0000082	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006405
GO:GO:0006511	GO:GO:0006606	GO:GO:0006810	GO:GO:0007049	GO:GO:0007051	GO:GO:0008150
GO:GO:0008152	GO:GO:0008536	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
GO:GO:0030234	GO:GO:0043547	GO:GO:0046907	InterPro:IPR000156	InterPro:IPR011993	PFAM:PF00638
InterPro:PH-like_dom_sf	PFscan:PS50196	PANTHER:PTHR23138	PANTHER:PTHR23138:SF105	InterPro:Ran_bind_dom	SMART:SM00160
EnsemblPlantsGene:SORBI_3009G104000	SUPFAM:SSF50729	unigene:Sbi.7341	UniParc:UPI0001A8899B	RefSeq:XP_002440926.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:42007257..42011228

Molecular Weight (calculated)

24010.8 Da

IEP (calculated)

4.416

GRAVY (calculated)

-0.726

Length

221 amino acids

Sequence
(BLAST)

001: MADKEPVVER PEAAEEEDAS AAAAAAGEEE DTGAQVAPIV RLEEVAVTTG EEDEDVLLDM KAKLYRFDKD GNQWKERGTG TVKLLKHKES SKVRLVMRQA
101: KTLKICANHL VASTTKMQEH AGSDKSCVWH AADFADGELK EEMFAIRFGS VENCKKFKEL IEEIAESLTK NEGKEGEDGS STAELLEKLT VSEDKSEGSG
201: KSESTDSGKV NETKSDAAPA E

Best Arabidopsis Sequence Match ( AT2G30060.1 )
(BLAST)

001: MASISNEPER ENRDEEETGA NEDEDTGAQV APIVRLEEVA VTTGEEDEDT ILDLKSKLYR FDKDGSQWKE RGAGTVKFLK HRVSGKIRLV MRQSKTLKIC
101: ANHLVGSGMS VQEHAGNDKS CVWHARDFSD GELKDELFCI RFASVENCKA FMQKFKEVAE SEEEKEESKD ASDTAGLLEK LTVEEKESEK KPVEKAEENK
201: KSEAVEEKKT EESVPSA

Arabidopsis Description

RANBP1BRan-binding protein 1 homolog b [Source:UniProtKB/Swiss-Prot;Acc:Q8RWG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.