Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86501 | Canola | cytosol | 11.24 | 23.26 |
| VIT_06s0004g06880.t01 | Wine grape | cytosol | 56.18 | 22.42 |
| CDX86496 | Canola | cytosol | 56.18 | 22.32 |
| CDY15604 | Canola | cytosol | 56.18 | 22.32 |
| CDY59068 | Canola | cytosol | 56.18 | 22.22 |
| GSMUA_Achr7P22420_001 | Banana | cytosol | 50.56 | 21.95 |
| CDY09935 | Canola | cytosol | 55.06 | 21.78 |
| KRH35051 | Soybean | endoplasmic reticulum | 52.81 | 21.56 |
| KRG91719 | Soybean | endoplasmic reticulum | 53.93 | 21.52 |
| CDY06679 | Canola | cytosol | 52.81 | 21.36 |
| GSMUA_Achr11P... | Banana | cytosol | 49.44 | 21.26 |
| Os03t0292800-01 | Rice | plastid | 48.31 | 20.57 |
| HORVU1Hr1G059970.2 | Barley | cytosol | 50.56 | 20.55 |
| TraesCS4D01G194600.1 | Wheat | cytosol | 47.19 | 20.39 |
| GSMUA_Achr9P04480_001 | Banana | cytosol | 50.56 | 20.36 |
| CDX84862 | Canola | cytosol | 50.56 | 20.36 |
| TraesCS4A01G110400.1 | Wheat | cytosol | 47.19 | 20.29 |
| TraesCS4B01G193600.1 | Wheat | cytosol | 47.19 | 20.29 |
| TraesCS1A01G223800.1 | Wheat | cytosol | 50.56 | 20.27 |
| TraesCS1B01G237100.1 | Wheat | cytosol | 50.56 | 20.27 |
| TraesCS1D01G225400.1 | Wheat | cytosol | 50.56 | 20.27 |
| EER92413 | Sorghum | cytosol | 47.19 | 20.1 |
| Zm00001d028755_P001 | Maize | cytosol | 50.56 | 20.0 |
| CDY24034 | Canola | cytosol | 48.31 | 20.0 |
| Os05t0350600-01 | Rice | cytosol, plasma membrane, plastid | 49.44 | 20.0 |
| EES19356 | Sorghum | cytosol | 49.44 | 19.91 |
| Zm00001d010504_P001 | Maize | extracellular | 49.44 | 19.91 |
| GSMUA_Achr11P... | Banana | cytosol | 46.07 | 19.25 |
| GSMUA_Achr10P... | Banana | cytosol | 44.94 | 18.96 |
| Zm00001d047727_P002 | Maize | cytosol | 47.19 | 18.58 |
| HORVU4Hr1G056140.3 | Barley | plastid | 48.31 | 15.58 |
| Zm00001d037993_P001 | Maize | cytosol | 47.19 | 15.22 |
| CDY10250 | Canola | plastid | 33.71 | 12.2 |
Protein Annotations
| EnsemblPlants:CDX80354 | EnsemblPlantsGene:GSBRNA2T00133414001 | ncoils:Coil | PANTHER:PTHR23138 | PANTHER:PTHR23138:SF107 | ProteinID:CDX80354 |
| ProteinID:CDX80354.1 | SEG:seg | UniParc:UPI0004EF09E5 | MapMan:35.2 | : | : |
Description
BnaC09g33880D
Coordinates
chrLK031820:+:2100538..2100897
Molecular Weight (calculated)
10065.7 Da
IEP (calculated)
4.021
GRAVY (calculated)
-0.456
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MASTELEHEH REEDAEVHEA EDTGAQVAPI VRLEEVAVTT GEEDEDAVLD LRQSPPFVWD ELKDELFCIV GMKSRVYGTL PIFPRRVEG
001: MASTEPEREN REDETEVNED EDTGAQVAPI VRLEEVAVTT GEEDEDAVLD LKSKMYRFDK EGNQWKERGA GTVKLLKHKE TGKVRLVMRQ SKTLKICANH
101: LISSGMSVQE HSGNEKSCLW HATDFSDGEL KDELFCIRFA SIENCKTFME KFTEIAESQQ VGKESTQGDE AAGLIENLSV EENISEEKAK EAEEKEPAKE
201: DKETKKEKVE EEKKTEAST
101: LISSGMSVQE HSGNEKSCLW HATDFSDGEL KDELFCIRFA SIENCKTFME KFTEIAESQQ VGKESTQGDE AAGLIENLSV EENISEEKAK EAEEKEPAKE
201: DKETKKEKVE EEKKTEAST
Arabidopsis Description
RANBP1CAt5g58590 [Source:UniProtKB/TrEMBL;Acc:Q1WWI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.