CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65697	Soybean	cytosol	64.19	73.87
VIT_08s0217g00030.t01	Wine grape	cytosol	65.5	67.87
GSMUA_Achr7P22420_001	Banana	cytosol	58.52	65.37
GSMUA_Achr11P...	Banana	cytosol	58.08	64.25
KRH35051	Soybean	endoplasmic reticulum	58.95	61.93
GSMUA_Achr10P...	Banana	cytosol	56.33	61.14
GSMUA_Achr11P...	Banana	cytosol	56.77	61.03
KRG91719	Soybean	endoplasmic reticulum	58.95	60.54
Os03t0292800-01	Rice	plastid	55.02	60.29
EER92413	Sorghum	cytosol	54.59	59.81
EES19356	Sorghum	cytosol	57.64	59.73
Os05t0350600-01	Rice	cytosol, plasma membrane, plastid	57.21	59.55
TraesCS4D01G194600.1	Wheat	cytosol	53.28	59.22
TraesCS4A01G110400.1	Wheat	cytosol	53.28	58.94
GSMUA_Achr9P04480_001	Banana	cytosol	56.77	58.82
TraesCS4B01G193600.1	Wheat	cytosol	52.84	58.45
Zm00001d010504_P001	Maize	extracellular	56.33	58.37
TraesCS1A01G223800.1	Wheat	cytosol	56.33	58.11
TraesCS1B01G237100.1	Wheat	cytosol	56.33	58.11
TraesCS1D01G225400.1	Wheat	cytosol	56.33	58.11
HORVU1Hr1G059970.2	Barley	cytosol	55.46	57.99
Zm00001d028755_P001	Maize	cytosol	55.02	56.0
Zm00001d047727_P002	Maize	cytosol	54.15	54.87
Zm00001d037993_P001	Maize	cytosol	57.21	47.46
HORVU4Hr1G056140.3	Barley	plastid	52.84	43.84

Protein Annotations

EntrezGene:100788910	Gene3D:2.30.29.30	MapMan:23.5.1.6	EMBL:ACUP02000528	EnsemblPlantsGene:GLYMA_01G119300	GO:GO:0000082
GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006405	GO:GO:0006511	GO:GO:0006606
GO:GO:0006810	GO:GO:0007049	GO:GO:0007051	GO:GO:0008150	GO:GO:0008152	GO:GO:0008536
GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030234	GO:GO:0043547
GO:GO:0046907	UniProt:I1J7C7	InterPro:IPR000156	InterPro:IPR011993	EnsemblPlants:KRH75945	ProteinID:KRH75945
ProteinID:KRH75945.1	PFAM:PF00638	InterPro:PH-like_dom_sf	PFscan:PS50196	PANTHER:PTHR23138	PANTHER:PTHR23138:SF107
InterPro:Ran_bind_dom	SMART:SM00160	SUPFAM:SSF50729	UniParc:UPI00023374E3	:	:

Description

hypothetical protein

Coordinates

chr1:-:40965934..40969182

Molecular Weight (calculated)

25589.5 Da

IEP (calculated)

4.348

GRAVY (calculated)

-0.932

Length

229 amino acids

Sequence
(BLAST)

001: MATTEPEHRR DENDDDSVTA EDEDTGAQVA PIVKLEEVAV TTGEEDEDPI LDLKAKLYRF DKEGNQWKER GGGNVKLLKH KVTGKVRLVM RQSKTLKICA
101: NHLVHHSLTV QEHSGNEKSC VWHASDFADG ELKDELFCIR FPSVENCKAF MTTMQEVAES QGEGEENKDA SATADLLEKL TVGEDKSDEK EPEKVQITKK
201: LTVGEDKSED EEPEMATNTN EKGEQDVEA

Best Arabidopsis Sequence Match ( AT2G30060.1 )
(BLAST)

001: MASISNEPER ENRDEEETGA NEDEDTGAQV APIVRLEEVA VTTGEEDEDT ILDLKSKLYR FDKDGSQWKE RGAGTVKFLK HRVSGKIRLV MRQSKTLKIC
101: ANHLVGSGMS VQEHAGNDKS CVWHARDFSD GELKDELFCI RFASVENCKA FMQKFKEVAE SEEEKEESKD ASDTAGLLEK LTVEEKESEK KPVEKAEENK
201: KSEAVEEKKT EESVPSA

Arabidopsis Description

RANBP1BRan-binding protein 1 homolog b [Source:UniProtKB/Swiss-Prot;Acc:Q8RWG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.