Factsheet for VIT_08s0217g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g06880.t01	Wine grape	cytosol	77.83	77.13
KRH65697	Soybean	cytosol	59.73	66.33
KRH75945	Soybean	cytosol	67.87	65.5
VIT_04s0008g01410.t01	Wine grape	cytosol	61.54	61.82

Protein Annotations

EntrezGene:100243801	wikigene:100243801	Gene3D:2.30.29.30	MapMan:23.5.1.6	ProteinID:CBI18249	ProteinID:CBI18249.3
UniProt:D7SRG8	EMBL:FN594969	GO:GO:0000082	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006405	GO:GO:0006511	GO:GO:0006606	GO:GO:0006810	GO:GO:0007049	GO:GO:0007051
GO:GO:0008150	GO:GO:0008152	GO:GO:0008536	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	GO:GO:0030234	GO:GO:0043547	GO:GO:0046907	InterPro:IPR000156	InterPro:IPR011993
EntrezGene:LOC100243801	wikigene:LOC100243801	PFAM:PF00638	InterPro:PH-like_dom_sf	PFscan:PS50196	PANTHER:PTHR23138
PANTHER:PTHR23138:SF107	InterPro:Ran_bind_dom	SMART:SM00160	SUPFAM:SSF50729	TIGR:TC54781	UniParc:UPI00015CBB13
ArrayExpress:VIT_08s0217g00030	EnsemblPlantsGene:VIT_08s0217g00030	EnsemblPlants:VIT_08s0217g00030.t01	unigene:Vvi.3187	RefSeq:XP_002262903	RefSeq:XP_002262903.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:8106640..8113612

Molecular Weight (calculated)

24312.4 Da

IEP (calculated)

4.485

GRAVY (calculated)

-0.722

Length

221 amino acids

Sequence
(BLAST)

001: MASTGPERRE EEDAPAGEDE DTGAQVAPIV KLEVVAVTTG EEEEDAILDL KAKLYRFDKE GKQWKERGVG TVKFLKHKGS GKVRLVMRQS KTLKICANHL
101: VLPTMTVQEH SGNDKSCVWH ATDFADGELK DELFCIRFAS VENCKTFMEM FQEVAESQGK KEESEDASAA AGLLEKLSVG DSKTEDKGQE EGSLATKEKV
201: AVDKEEVQAE ADKKDETESP A

Best Arabidopsis Sequence Match ( AT1G07140.1 )
(BLAST)

001: MATNEPEHEH RDEEEAGANE DEDTGAQVAP IVRLEEVAVT TGEEDEDAVL DLKSKLYRFD KDANQWKERG AGTVKFLKHK NTGKIRLVMR QSKTLKICAN
101: HFVKSGMSVQ EHVGNEKSCV WHARDFADGE LKDELFCIRF ASIENCKTFM QKFKEVAESE EEKEESKDAA DTAGLLEKLT VEETKTEEKT EAKAVETAKT
201: EVKAEEKKES EAEKSGEAKK TEESGPST

Arabidopsis Description

RANBP1ARan-binding protein 1 homolog a [Source:UniProtKB/Swiss-Prot;Acc:Q9LMK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.