CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75945	Soybean	cytosol	73.87	64.19
VIT_08s0217g00030.t01	Wine grape	cytosol	66.33	59.73
GSMUA_Achr7P22420_001	Banana	cytosol	59.8	58.05
GSMUA_Achr11P...	Banana	cytosol	59.3	57.0
GSMUA_Achr10P...	Banana	cytosol	58.79	55.45
KRH35051	Soybean	endoplasmic reticulum	59.8	54.59
Os03t0292800-01	Rice	plastid	56.78	54.07
EER92413	Sorghum	cytosol	56.28	53.59
KRG91719	Soybean	endoplasmic reticulum	59.8	53.36
TraesCS4D01G194600.1	Wheat	cytosol	54.77	52.91
TraesCS4A01G110400.1	Wheat	cytosol	54.77	52.66
GSMUA_Achr11P...	Banana	cytosol	56.28	52.58
TraesCS4B01G193600.1	Wheat	cytosol	54.27	52.17
HORVU1Hr1G059970.2	Barley	cytosol	56.28	51.14
EES19356	Sorghum	cytosol	56.28	50.68
GSMUA_Achr9P04480_001	Banana	cytosol	56.28	50.68
Zm00001d028755_P001	Maize	cytosol	57.29	50.67
Zm00001d047727_P002	Maize	cytosol	57.29	50.44
Zm00001d010504_P001	Maize	extracellular	55.28	49.77
Os05t0350600-01	Rice	cytosol, plasma membrane, plastid	54.77	49.55
TraesCS1B01G237100.1	Wheat	cytosol	54.77	49.1
TraesCS1D01G225400.1	Wheat	cytosol	54.77	49.1
TraesCS1A01G223800.1	Wheat	cytosol	54.77	49.1
Zm00001d037993_P001	Maize	cytosol	55.78	40.22
HORVU4Hr1G056140.3	Barley	plastid	55.28	39.86

Protein Annotations

Gene3D:2.30.29.30	MapMan:23.5.1.6	EMBL:ACUP02001467	EnsemblPlantsGene:GLYMA_03G055400	GO:GO:0000082	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006405	GO:GO:0006511	GO:GO:0006606	GO:GO:0006810
GO:GO:0007049	GO:GO:0007051	GO:GO:0008150	GO:GO:0008152	GO:GO:0008536	GO:GO:0009056
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030234	GO:GO:0043547	GO:GO:0046907
InterPro:IPR000156	InterPro:IPR011993	UniProt:K7KD30	EnsemblPlants:KRH65697	ProteinID:KRH65697	ProteinID:KRH65697.1
PFAM:PF00638	InterPro:PH-like_dom_sf	PFscan:PS50196	PANTHER:PTHR23138	PANTHER:PTHR23138:SF107	InterPro:Ran_bind_dom
SMART:SM00160	SUPFAM:SSF50729	UniParc:UPI000296186B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:7599941..7602623

Molecular Weight (calculated)

22160.6 Da

IEP (calculated)

4.457

GRAVY (calculated)

-0.887

Length

199 amino acids

Sequence
(BLAST)

001: QHQWPPPSHH NDDDDHVPAE DEDTGAQVAP IVKLEEVAVS TGEEEEDPIL DLKANLYRFD NEGNEWKERG GGNVKLLKHK VSGKVRLVMR QSKTLSRSAP
101: IILEHSGNEK SCVWHASDFA DGELKDELFC IRFPSVENCK AFMKTMQEVA ESQGEEEENK DASAAAGLLK KLTVGEDKLE DKEPPEKATD TNVKGEQDV

Best Arabidopsis Sequence Match ( AT2G30060.1 )
(BLAST)

001: MASISNEPER ENRDEEETGA NEDEDTGAQV APIVRLEEVA VTTGEEDEDT ILDLKSKLYR FDKDGSQWKE RGAGTVKFLK HRVSGKIRLV MRQSKTLKIC
101: ANHLVGSGMS VQEHAGNDKS CVWHARDFSD GELKDELFCI RFASVENCKA FMQKFKEVAE SEEEKEESKD ASDTAGLLEK LTVEEKESEK KPVEKAEENK
201: KSEAVEEKKT EESVPSA

Arabidopsis Description

RANBP1BRan-binding protein 1 homolog b [Source:UniProtKB/Swiss-Prot;Acc:Q8RWG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.