Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24034 | Canola | cytosol | 87.1 | 87.91 |
| Bra022775.1-P | Field mustard | cytosol | 88.48 | 86.88 |
| CDX84862 | Canola | cytosol | 88.48 | 86.88 |
| AT1G07140.1 | Thale cress | cytosol | 80.18 | 76.32 |
| AT5G58590.1 | Thale cress | cytosol | 71.43 | 70.78 |
| Solyc06g082120.2.1 | Tomato | extracellular | 67.74 | 69.67 |
| VIT_06s0004g06880.t01 | Wine grape | cytosol | 70.05 | 68.16 |
| KRG91719 | Soybean | endoplasmic reticulum | 68.2 | 66.37 |
| KRH35051 | Soybean | endoplasmic reticulum | 66.36 | 66.06 |
| PGSC0003DMT400052941 | Potato | cytosol | 64.52 | 66.04 |
| GSMUA_Achr7P22420_001 | Banana | cytosol | 61.75 | 65.37 |
| PGSC0003DMT400078073 | Potato | cytosol | 66.36 | 65.16 |
| GSMUA_Achr11P... | Banana | cytosol | 58.99 | 61.84 |
| TraesCS4D01G194600.1 | Wheat | cytosol | 57.6 | 60.68 |
| GSMUA_Achr10P... | Banana | cytosol | 58.53 | 60.19 |
| TraesCS4A01G110400.1 | Wheat | cytosol | 57.14 | 59.9 |
| TraesCS4B01G193600.1 | Wheat | cytosol | 56.68 | 59.42 |
| Os03t0292800-01 | Rice | plastid | 57.14 | 59.33 |
| Os05t0350600-01 | Rice | cytosol, plasma membrane, plastid | 59.91 | 59.09 |
| EES19356 | Sorghum | cytosol | 59.91 | 58.82 |
| EER92413 | Sorghum | cytosol | 56.22 | 58.37 |
| GSMUA_Achr11P... | Banana | cytosol | 57.14 | 58.22 |
| HORVU1Hr1G059970.2 | Barley | cytosol | 58.53 | 57.99 |
| Zm00001d010504_P001 | Maize | extracellular | 58.99 | 57.92 |
| TraesCS1A01G223800.1 | Wheat | cytosol | 58.99 | 57.66 |
| TraesCS1B01G237100.1 | Wheat | cytosol | 58.99 | 57.66 |
| TraesCS1D01G225400.1 | Wheat | cytosol | 58.99 | 57.66 |
| GSMUA_Achr9P04480_001 | Banana | cytosol | 57.14 | 56.11 |
| Zm00001d028755_P001 | Maize | cytosol | 55.3 | 53.33 |
| Zm00001d047727_P002 | Maize | cytosol | 54.84 | 52.65 |
| Zm00001d037993_P001 | Maize | cytosol | 58.53 | 46.01 |
| HORVU4Hr1G056140.3 | Barley | plastid | 57.6 | 45.29 |
Protein Annotations
| Gene3D:2.30.29.30 | MapMan:23.5.1.6 | EntrezGene:817557 | EntrezGene:837225 | UniProt:A0A178VR56 | ProteinID:AAC16966.1 |
| ProteinID:AAF82206.1 | ProteinID:AAM14982.1 | ProteinID:AEC08340.1 | ProteinID:AEE28081.1 | EMBL:AF057024 | EMBL:AF370491 |
| EMBL:AF410294 | ArrayExpress:AT2G30060 | EnsemblPlantsGene:AT2G30060 | RefSeq:AT2G30060 | TAIR:AT2G30060 | RefSeq:AT2G30060-TAIR-G |
| EnsemblPlants:AT2G30060.1 | TAIR:AT2G30060.1 | EMBL:AY093099 | EMBL:AY097364 | EMBL:BT002193 | EMBL:BT020304 |
| EMBL:BT020473 | EMBL:BT024607 | ncoils:Coil | GO:GO:0000082 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005737 | GO:GO:0006405 | GO:GO:0006511 | GO:GO:0006606 |
| GO:GO:0006810 | GO:GO:0007049 | GO:GO:0007051 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008536 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0043547 | GO:GO:0046907 | GO:GO:0051028 | InterPro:IPR000156 | InterPro:IPR011993 | RefSeq:NP_172194.1 |
| RefSeq:NP_180567.1 | ProteinID:OAP08829.1 | ProteinID:OAP17297.1 | PFAM:PF00638 | InterPro:PH-like_dom_sf | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50196 | PANTHER:PTHR23138 | PANTHER:PTHR23138:SF107 | UniProt:Q8RWG8 | InterPro:Ran_bind_dom | SMART:SM00160 |
| SUPFAM:SSF50729 | UniParc:UPI00000A615C | EMBL:X97377 | EMBL:X97378 | SEG:seg | : |
Description
RANBP1BRan-binding protein 1 homolog b [Source:UniProtKB/Swiss-Prot;Acc:Q8RWG8]
Coordinates
chr2:+:12826804..12828987
Molecular Weight (calculated)
24390.2 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.938
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MASISNEPER ENRDEEETGA NEDEDTGAQV APIVRLEEVA VTTGEEDEDT ILDLKSKLYR FDKDGSQWKE RGAGTVKFLK HRVSGKIRLV MRQSKTLKIC
101: ANHLVGSGMS VQEHAGNDKS CVWHARDFSD GELKDELFCI RFASVENCKA FMQKFKEVAE SEEEKEESKD ASDTAGLLEK LTVEEKESEK KPVEKAEENK
201: KSEAVEEKKT EESVPSA
101: ANHLVGSGMS VQEHAGNDKS CVWHARDFSD GELKDELFCI RFASVENCKA FMQKFKEVAE SEEEKEESKD ASDTAGLLEK LTVEEKESEK KPVEKAEENK
201: KSEAVEEKKT EESVPSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.