Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G30060.1 | Thale cress | cytosol | 70.78 | 71.43 |
| AT1G07140.1 | Thale cress | cytosol | 73.52 | 70.61 |
| Solyc06g082120.2.1 | Tomato | extracellular | 66.67 | 69.19 |
| VIT_06s0004g06880.t01 | Wine grape | cytosol | 69.41 | 68.16 |
| PGSC0003DMT400052941 | Potato | cytosol | 65.75 | 67.92 |
| PGSC0003DMT400078073 | Potato | cytosol | 66.21 | 65.61 |
| KRG91719 | Soybean | endoplasmic reticulum | 66.21 | 65.02 |
| KRH35051 | Soybean | endoplasmic reticulum | 64.38 | 64.68 |
| GSMUA_Achr7P22420_001 | Banana | cytosol | 57.53 | 61.46 |
| GSMUA_Achr11P... | Banana | cytosol | 57.99 | 61.35 |
| Os03t0292800-01 | Rice | plastid | 57.53 | 60.29 |
| HORVU1Hr1G059970.2 | Barley | cytosol | 58.9 | 58.9 |
| TraesCS1D01G225400.1 | Wheat | cytosol | 59.36 | 58.56 |
| TraesCS1A01G223800.1 | Wheat | cytosol | 59.36 | 58.56 |
| GSMUA_Achr11P... | Banana | cytosol | 56.62 | 58.22 |
| TraesCS1B01G237100.1 | Wheat | cytosol | 58.9 | 58.11 |
| GSMUA_Achr9P04480_001 | Banana | cytosol | 58.45 | 57.92 |
| GSMUA_Achr10P... | Banana | cytosol | 55.71 | 57.82 |
| Os05t0350600-01 | Rice | cytosol, plasma membrane, plastid | 57.99 | 57.73 |
| TraesCS4D01G194600.1 | Wheat | cytosol | 53.88 | 57.28 |
| TraesCS4A01G110400.1 | Wheat | cytosol | 53.88 | 57.0 |
| EER92413 | Sorghum | cytosol | 54.34 | 56.94 |
| TraesCS4B01G193600.1 | Wheat | cytosol | 53.42 | 56.52 |
| Zm00001d010504_P001 | Maize | extracellular | 56.62 | 56.11 |
| EES19356 | Sorghum | cytosol | 55.71 | 55.2 |
| Zm00001d028755_P001 | Maize | cytosol | 55.25 | 53.78 |
| Zm00001d047727_P002 | Maize | cytosol | 54.34 | 52.65 |
| Zm00001d037993_P001 | Maize | cytosol | 56.16 | 44.57 |
| HORVU4Hr1G056140.3 | Barley | plastid | 54.79 | 43.48 |
Protein Annotations
| Gene3D:2.30.29.30 | MapMan:23.5.1.6 | EntrezGene:835973 | UniProt:A0A178UPR8 | ProteinID:AED97073.1 | ArrayExpress:AT5G58590 |
| EnsemblPlantsGene:AT5G58590 | RefSeq:AT5G58590 | TAIR:AT5G58590 | RefSeq:AT5G58590-TAIR-G | EnsemblPlants:AT5G58590.1 | TAIR:AT5G58590.1 |
| ProteinID:BAA97328.1 | EMBL:BT024924 | ncoils:Coil | GO:GO:0000060 | GO:GO:0000082 | GO:GO:0003674 |
| GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005737 | GO:GO:0006405 | GO:GO:0006511 |
| GO:GO:0006810 | GO:GO:0007049 | GO:GO:0007051 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008536 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0043547 | GO:GO:0046907 | GO:GO:0051028 | InterPro:IPR000156 | InterPro:IPR011993 | RefSeq:NP_200667.2 |
| ProteinID:OAO95869.1 | UniProt:P92985 | PFAM:PF00638 | InterPro:PH-like_dom_sf | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009013 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50196 | PANTHER:PTHR23138 | PANTHER:PTHR23138:SF107 | UniProt:Q1WWI2 | Symbol:RANBP1 | InterPro:Ran_bind_dom |
| SMART:SM00160 | SUPFAM:SSF50729 | EMBL:U62742 | UniParc:UPI00000A92F0 | SEG:seg | : |
Description
RANBP1CAt5g58590 [Source:UniProtKB/TrEMBL;Acc:Q1WWI2]
Coordinates
chr5:-:23680063..23681935
Molecular Weight (calculated)
24723.6 Da
IEP (calculated)
4.400
GRAVY (calculated)
-0.995
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTEPEREN REDETEVNED EDTGAQVAPI VRLEEVAVTT GEEDEDAVLD LKSKMYRFDK EGNQWKERGA GTVKLLKHKE TGKVRLVMRQ SKTLKICANH
101: LISSGMSVQE HSGNEKSCLW HATDFSDGEL KDELFCIRFA SIENCKTFME KFTEIAESQQ VGKESTQGDE AAGLIENLSV EENISEEKAK EAEEKEPAKE
201: DKETKKEKVE EEKKTEAST
101: LISSGMSVQE HSGNEKSCLW HATDFSDGEL KDELFCIRFA SIENCKTFME KFTEIAESQQ VGKESTQGDE AAGLIENLSV EENISEEKAK EAEEKEPAKE
201: DKETKKEKVE EEKKTEAST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.