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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035562.1-P Field mustard cytosol, nucleus, plastid 97.77 99.09
AT5G55190.1 Thale cress cytosol 96.43 97.74
VIT_04s0008g05020.t01 Wine grape cytosol 95.98 97.29
KRH61811 Soybean cytosol 95.54 96.83
KRH61808 Soybean nucleus 95.54 96.83
KRH52484 Soybean cytosol 95.54 96.83
KRH52483 Soybean nucleus 95.54 96.83
KRH52485 Soybean cytosol 95.09 96.38
Os01t0611100-01 Rice plastid 92.86 94.12
Solyc01g104680.2.1 Tomato cytosol 92.86 94.12
Solyc01g104700.2.1 Tomato cytosol, nucleus 92.86 94.12
PGSC0003DMT400076528 Potato cytosol 92.41 93.67
Solyc05g023800.2.1 Tomato nucleus 92.41 93.67
PGSC0003DMT400016576 Potato cytosol 92.41 93.67
HORVU0Hr1G030130.1 Barley cytosol 90.62 93.55
Zm00001d011474_P001 Maize cytosol, plastid 91.52 92.76
Zm00001d044054_P002 Maize cytosol 91.52 92.76
KXG32999 Sorghum cytosol 91.52 92.76
EES01060 Sorghum cytosol 90.62 92.27
Zm00001d011328_P001 Maize cytosol 51.79 89.23
CDY06600 Canola cytosol 97.77 88.31
CDX70904 Canola extracellular 93.3 88.19
Zm00001d039091_P002 Maize cytosol 91.52 86.86
CDY20779 Canola vacuole 98.21 86.61
CDY17309 Canola plastid 97.77 84.56
KXG22580 Sorghum cytosol, nucleus 35.71 84.21
VIT_11s0016g04780.t01 Wine grape plastid 95.98 82.69
TraesCS7B01G254000.2 Wheat cytosol 82.14 82.51
Zm00001d039090_P001 Maize cytosol 91.52 81.03
KRH61809 Soybean nucleus 95.54 73.79
GSMUA_AchrUn_... Banana cytosol 69.2 68.58
CDY61737 Canola cytosol, mitochondrion, nucleus 18.3 61.19
TraesCS7D01G155200.2 Wheat plastid 24.55 27.92
Protein Annotations
MapMan:23.5.1.4Gene3D:3.40.50.300GO:A0A078G4L1UniProt:A0A078G4L1EnsemblPlants:CDY19907ProteinID:CDY19907
ProteinID:CDY19907.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006810
GO:GO:0006913GO:GO:0008150GO:GO:0015031GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00009696001InterPro:IPR002041
InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00627PFscan:PS51418PANTHER:PTHR24071PANTHER:PTHR24071:SF7
InterPro:Ran_GTPaseSMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176SUPFAM:SSF52540
InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI0004EE593BSEG:seg:
Description
BnaC09g31730DGTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4L1]
Coordinates
chrLK032101:-:486011..487777
Molecular Weight (calculated)
25444.3 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.410
Length
224 amino acids
Sequence
(BLAST)
001: MFLSAVPNQQ TVDYPSFKLV IVGDGGTGKT TFVKRHLTGE FEKKYEPTIG VEVHPLDFFT NCGKIRFYCW DTAGQEKFGG LRDGYYIHGQ CAVIMFDVTA
101: RLTYKNVPTW HRDLCRVCEN IPIVLCGNKV DVKNRQVKAK QVTFHRKKNL QYYEISAKSN YNFEKPFLYL ARKLAGDPNL HFVESPALAP PEVQIDMAAQ
201: QQHEAELAAA ASQPLPDDDD DTFE
Best Arabidopsis Sequence Match ( AT5G55190.1 )
(BLAST)
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.