CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22580	Sorghum	cytosol, nucleus	46.27	32.63
Zm00001d011328_P001	Maize	cytosol	47.76	24.62
CDX70904	Canola	extracellular	74.63	21.1
VIT_09s0002g05940.t01	Wine grape	cytosol	62.69	19.0
CDY19907	Canola	cytosol	61.19	18.3
Zm00001d044054_P002	Maize	cytosol	59.7	18.1
Zm00001d011474_P001	Maize	cytosol, plastid	59.7	18.1
KXG32999	Sorghum	cytosol	59.7	18.1
Os01t0611100-01	Rice	plastid	58.21	17.65
EES01060	Sorghum	cytosol	56.72	17.27
CDY06600	Canola	cytosol	61.19	16.53
Zm00001d039091_P002	Maize	cytosol	58.21	16.53
CDY20779	Canola	vacuole	59.7	15.75
CDY17309	Canola	plastid	59.7	15.44
Zm00001d039090_P001	Maize	cytosol	58.21	15.41
VIT_04s0008g05030.t01	Wine grape	cytosol	61.19	13.44
TraesCS7B01G254000.2	Wheat	cytosol	43.28	13.0
TraesCS7D01G155200.2	Wheat	plastid	5.97	2.03

Protein Annotations

MapMan:35.2	UniProt:A0A078J5N6	EnsemblPlants:CDY61737	ProteinID:CDY61737	ProteinID:CDY61737.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00034280001	InterPro:IPR002041	PANTHER:PTHR24071	PANTHER:PTHR24071:SF7	InterPro:Ran_GTPase	UniParc:UPI0004EE7006
SEG:seg	:	:	:	:	:

Description

BnaCnng38390DBnaCnng38390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5N6]

Coordinates

chrLK034033:+:3709..4034

Molecular Weight (calculated)

7352.5 Da

IEP (calculated)

4.005

GRAVY (calculated)

-0.610

Length

67 amino acids

Sequence
(BLAST)

1: MAVMGRPQAK QQIDHETCCD QNLHFVRSPA LAPPEVHIDV AEQQKNEADL IGAAAQPLPD DDDDAFE

Best Arabidopsis Sequence Match ( AT5G20010.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDQNLHFV ETPALAPPEV HIDIADQQKN
201: EAELLQAAAQ PLPDDDDDIF E

Arabidopsis Description

RAN1GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UC18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.