Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002926.1-P | Field mustard | cytosol, nucleus, plastid | 88.31 | 99.09 |
| AT5G55190.1 | Thale cress | cytosol | 87.9 | 98.64 |
| VIT_04s0008g05020.t01 | Wine grape | cytosol | 87.5 | 98.19 |
| CDY19907 | Canola | cytosol | 88.31 | 97.77 |
| KRH61811 | Soybean | cytosol | 87.1 | 97.74 |
| KRH61808 | Soybean | nucleus | 87.1 | 97.74 |
| KRH52484 | Soybean | cytosol | 87.1 | 97.74 |
| KRH52483 | Soybean | nucleus | 87.1 | 97.74 |
| KRH52485 | Soybean | cytosol | 86.69 | 97.29 |
| Os01t0611100-01 | Rice | plastid | 84.68 | 95.02 |
| Solyc01g104680.2.1 | Tomato | cytosol | 84.68 | 95.02 |
| Solyc01g104700.2.1 | Tomato | cytosol, nucleus | 84.68 | 95.02 |
| Solyc05g023800.2.1 | Tomato | nucleus | 84.27 | 94.57 |
| PGSC0003DMT400076528 | Potato | cytosol | 84.27 | 94.57 |
| PGSC0003DMT400016576 | Potato | cytosol | 84.27 | 94.57 |
| HORVU0Hr1G030130.1 | Barley | cytosol | 82.66 | 94.47 |
| Zm00001d011474_P001 | Maize | cytosol, plastid | 83.47 | 93.67 |
| Zm00001d044054_P002 | Maize | cytosol | 83.47 | 93.67 |
| KXG32999 | Sorghum | cytosol | 83.47 | 93.67 |
| EES01060 | Sorghum | cytosol | 82.66 | 93.18 |
| CDX70904 | Canola | extracellular | 85.89 | 89.87 |
| Zm00001d011328_P001 | Maize | cytosol | 46.77 | 89.23 |
| Zm00001d039091_P002 | Maize | cytosol | 83.47 | 87.71 |
| CDY20779 | Canola | vacuole | 89.52 | 87.4 |
| CDY17309 | Canola | plastid | 89.11 | 85.33 |
| KXG22580 | Sorghum | cytosol, nucleus | 32.26 | 84.21 |
| VIT_11s0016g04780.t01 | Wine grape | plastid | 87.9 | 83.85 |
| TraesCS7B01G254000.2 | Wheat | cytosol | 74.6 | 82.96 |
| Zm00001d039090_P001 | Maize | cytosol | 83.47 | 81.82 |
| KRH61809 | Soybean | nucleus | 87.5 | 74.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.9 | 69.03 |
| CDY61737 | Canola | cytosol, mitochondrion, nucleus | 16.53 | 61.19 |
| TraesCS7D01G155200.2 | Wheat | plastid | 24.19 | 30.46 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | GO:A0A078EX10 | EnsemblPlants:CDY06600 | ProteinID:CDY06600 | ProteinID:CDY06600.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006913 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00122739001 | InterPro:IPR002041 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00627 | PFscan:PS51418 | PANTHER:PTHR24071 | PANTHER:PTHR24071:SF7 | InterPro:Ran_GTPase |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF3721 | SEG:seg | : | : |
Description
BnaC02g13240D
Coordinates
chrLK031971:+:640001..646188
Molecular Weight (calculated)
27905.1 Da
IEP (calculated)
6.392
GRAVY (calculated)
-0.398
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDTIPCTTS TAEQISLRSI PSASVSSMAL PNQQTVDYPS FKLVIVGDGG TGKTTFVKRH LTGEFEKKYE PTIGVEVHPL DFFTNCGKIR FYCWDTAGQE
101: KFGGLRDGYY IHGQCAVIMF DVTARLTYKN VPTWHRDLCR VCENIPIVLC GNKVDVKNRQ VKAKQVTFHR KKNLQYYEIS AKSNYNFEKP FLYLARKLAG
201: DPNLHFVESP ALAPPEVQID MAAQQQHEAE LAAAASQPLP DDDDDTFE
101: KFGGLRDGYY IHGQCAVIMF DVTARLTYKN VPTWHRDLCR VCENIPIVLC GNKVDVKNRQ VKAKQVTFHR KKNLQYYEIS AKSNYNFEKP FLYLARKLAG
201: DPNLHFVESP ALAPPEVQID MAAQQQHEAE LAAAASQPLP DDDDDTFE
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.