Factsheet for TraesCS3B01G395900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G281400.1
TraesCS1B01G290600.2
TraesCS1D01G280700.2
TraesCS3A01G363700.2
TraesCS3B01G395900.1
TraesCS3D01G357200.1
TraesCS7B01G254000.2
TraesCS7D01G155200.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	TraesCS1A01G281400.1	AT2G39800.1	21798944
AT2G39800.1	TraesCS1B01G290600.2	AT2G39800.1	21798944
AT2G39800.1	TraesCS1D01G280700.2	AT2G39800.1	21798944
AT2G39800.1	TraesCS3A01G363700.2	AT2G39800.1	21798944
AT2G39800.1	TraesCS3B01G395900.1	AT2G39800.1	21798944
AT2G39800.1	TraesCS3D01G357200.1	AT2G39800.1	21798944
AT2G39800.1	TraesCS7B01G254000.2	AT5G20010.1	21798944
AT2G39800.1	TraesCS7D01G155200.2	AT5G20010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G357200.1	Wheat	cytosol	100.0	100.0
TraesCS3A01G363700.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	95.89	91.62
Os01t0848200-02	Rice	plasma membrane	89.32	88.71
KXG33696	Sorghum	cytosol	87.4	87.52
HORVU3Hr1G085760.5	Barley	cytosol, plastid	98.49	87.05
TraesCS1B01G290600.2	Wheat	mitochondrion	74.52	75.98
Zm00001d012391_P003	Maize	cytosol, peroxisome, plasma membrane	77.53	74.97
VIT_13s0019g02360.t01	Wine grape	cytosol	72.19	73.5
GSMUA_Achr10P...	Banana	cytosol	11.92	72.5
KRH15055	Soybean	nucleus	70.55	72.23
KRH73083	Soybean	endoplasmic reticulum	70.27	71.95
Solyc08g043170.2.1	Tomato	plastid	70.68	71.67
PGSC0003DMT400068829	Potato	cytosol	70.14	71.41
KRG97830	Soybean	endoplasmic reticulum	69.86	71.33
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	69.86	71.13
Bra000150.1-P	Field mustard	cytosol	68.77	70.21
CDY07635	Canola	cytosol	68.77	70.21
AT2G39800.1	Thale cress	cytosol	68.9	70.15
PGSC0003DMT400068827	Potato	cytosol	60.68	70.09
CDY61781	Canola	cytosol	68.63	70.07
CDX74830	Canola	cytosol	68.77	70.01
CDX76082	Canola	cytosol	68.63	69.97
Bra005012.1-P	Field mustard	cytosol	68.63	69.87
CDY20482	Canola	cytosol	68.49	69.73
CDX93233	Canola	cytosol	68.36	69.6
Bra014732.1-P	Field mustard	cytosol	68.49	69.54
CDY07034	Canola	cytosol	68.08	69.32
Bra007179.1-P	Field mustard	cytosol	68.77	69.05
CDY41203	Canola	cytosol	68.77	69.05
CDY40241	Canola	cytosol	68.77	69.05
Bra017051.1-P	Field mustard	cytosol	67.67	68.9
AT3G55610.1	Thale cress	cytosol	68.49	68.87
CDY65768	Canola	cytosol	67.95	68.32
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.38	59.73

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	InterPro:Asp/Glu/Uridylate_kinase	InterPro:G-glutamylP_reductase_CS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004349	GO:GO:0004350	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016491	GO:GO:0016620	GO:GO:0016740	GO:GO:0055114	InterPro:GPR_dom
InterPro:Glu/AcGlu_kinase	InterPro:Glu_5kinase/COase_Synthase	InterPro:Glutamate_5-kinase_CS	InterPro:IPR016162	InterPro:IPR016163	InterPro:IPR036393
HAMAP:MF_00412	HAMAP:MF_00456	InterPro:P5_carboxy_syn	PFAM:PF00171	PFAM:PF00696	PIRSF:PIRSF036429
PRINTS:PR00474	ScanProsite:PS00902	ScanProsite:PS01223	PANTHER:PTHR11063	PANTHER:PTHR11063:SF13	SUPFAM:SSF53633
SUPFAM:SSF53720	TIGRFAMs:TIGR00407	TIGRFAMs:TIGR01027	TIGRFAMs:TIGR01092	EnsemblPlantsGene:TraesCS3B01G395900	EnsemblPlants:TraesCS3B01G395900.1
TIGR:cd07079	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:623824626..623830505

Molecular Weight (calculated)

78677.9 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.022

Length

730 amino acids

Sequence
(BLAST)

001: MGRGGIGGAV AAADLENSDS TRGFVRDVKR IVVKVGTAVV TGQNGRLAMG RLGALCEQVK ELNFQGYEVI LVTSGAVGVG RQRLKYRKLI NSSFADLQNP
101: QLDLDGKACA AVGQSGLMAI YDTLFSQLDV TSSQLLVTDR DFRDPSFGHQ LRETVVSLLD LKVIPVFNEN DAISTRRAPY EDSSGIFWDN DSLATLLAKE
201: LDADLLIMLS DVEGLYSGPP SDPQSKIIHT YINEKHGKLI NFGEKSRVGR GGMQAKVAAA VTAASKGVPA VIASGFVTDS IIKIMRGEKI GTLFHNEANV
301: WDCSKEVTTR EMAVAAKDCS RHLQNLSSEE RKKILLDIAG ALDANVDLII SENEADLAAA QDSGYEKSLV ARMTLKAGKI TSLAESIRAI ADMEDPISHT
401: LKKTEVAKDL VFEKMYCPLG VLLIIFESRP DALVQIAALA IRSGNGLLLK GGKEAMRSNT ILHKVITSVI PDAVGKKLIG LVKSKDEIAD LLKLDDVIDL
501: VIPRGSNRLV SQIKAQTKIP VLGHADGICH VYIDKSADMD MAKRIVLDAK VDYPAACNAM ETLLVHKDLN KTEGLDDLLM ELAKEGVVIY GGPVAHDTLK
601: VPKVDSFHHE YSSMACTLEF VDDVQSAIDH INRYGSAHTD CIITTDKKSA DTFLQQVDSA AVFHNASTRF CDGTRFGLGA EVGISTGRIH ARGPVGVDGL
701: LTTRCILRGS GQVVNGDKGV VYTHKDLPLQ

Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)

001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA

Arabidopsis Description

P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.