CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01060
KXG22139
KXG22580
KXG32999
KXG33696

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	KXG22139	AT2G39800.1	21798944
AT2G39800.1	KXG33696	AT2G39800.1	21798944
AT2G39800.1	EES01060	AT5G20010.1	21798944
AT2G39800.1	KXG22580	AT5G20010.1	21798944
AT2G39800.1	KXG32999	AT5G20010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G357200.1	Wheat	cytosol	87.52	87.4
TraesCS3B01G395900.1	Wheat	cytosol	87.52	87.4
Os01t0848200-02	Rice	plasma membrane	87.93	87.21
Zm00001d012391_P003	Maize	cytosol, peroxisome, plasma membrane	85.6	82.65
TraesCS3A01G363700.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	85.73	81.81
HORVU3Hr1G085760.5	Barley	cytosol, plastid	87.79	77.48
KXG22139	Sorghum	cytosol	75.99	77.37
VIT_13s0019g02360.t01	Wine grape	cytosol	72.29	73.5
Solyc08g043170.2.1	Tomato	plastid	71.74	72.64
KRH73083	Soybean	endoplasmic reticulum	70.64	72.23
KRH15055	Soybean	nucleus	70.64	72.23
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	70.92	72.11
PGSC0003DMT400068829	Potato	cytosol	70.78	71.97
GSMUA_Achr10P...	Banana	cytosol	11.8	71.67
KRG97830	Soybean	endoplasmic reticulum	70.23	71.61
PGSC0003DMT400068827	Potato	cytosol	61.32	70.73
Bra005012.1-P	Field mustard	cytosol	68.72	69.87
CDY20482	Canola	cytosol	68.59	69.73
CDX74830	Canola	cytosol	68.59	69.73
Bra000150.1-P	Field mustard	cytosol	68.31	69.65
CDY07635	Canola	cytosol	68.31	69.65
AT2G39800.1	Thale cress	cytosol	68.45	69.6
CDX76082	Canola	cytosol	68.31	69.55
CDY61781	Canola	cytosol	68.18	69.51
CDY07034	Canola	cytosol	68.18	69.32
CDY40241	Canola	cytosol	69.0	69.19
CDY41203	Canola	cytosol	69.0	69.19
Bra007179.1-P	Field mustard	cytosol	69.0	69.19
CDX93233	Canola	cytosol	68.04	69.18
Bra014732.1-P	Field mustard	cytosol	68.18	69.12
Bra017051.1-P	Field mustard	cytosol	67.76	68.9
AT3G55610.1	Thale cress	cytosol	68.59	68.87
CDY65768	Canola	cytosol	67.9	68.18
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.69	60.4

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	UniProt:A0A1B6Q707	InterPro:AceGlu_kinase-like_sf
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	InterPro:Asp/Glu/Uridylate_kinase	InterPro:G-glutamylP_reductase_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004349	GO:GO:0004350	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006561
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016491	GO:GO:0016620	GO:GO:0016740	GO:GO:0055114	GO:GO:0055129
InterPro:GPR_dom	InterPro:Glu/AcGlu_kinase	InterPro:Glu_5kinase/COase_Synthase	InterPro:Glutamate_5-kinase_CS	InterPro:IPR016162	InterPro:IPR016163
InterPro:IPR036393	EnsemblPlants:KXG33696	ProteinID:KXG33696	ProteinID:KXG33696.1	HAMAP:MF_00412	HAMAP:MF_00456
InterPro:P5_carboxy_syn	PFAM:PF00171	PFAM:PF00696	PIRSF:PIRSF036429	PRINTS:PR00474	ScanProsite:PS00902
ScanProsite:PS01223	PANTHER:PTHR11063	PANTHER:PTHR11063:SF13	MetaCyc:PWY-3341	MetaCyc:PWY-6922	EnsemblPlantsGene:SORBI_3003G356000
SUPFAM:SSF53633	SUPFAM:SSF53720	TIGRFAMs:TIGR00407	TIGRFAMs:TIGR01027	TIGRFAMs:TIGR01092	UniParc:UPI0001C80AF9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67427644..67434548

Molecular Weight (calculated)

78366.3 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.040

Length

729 amino acids

Sequence
(BLAST)

001: MGRGGIGGAV GMAMENADSA RAFVKDVKRI IIKVGTAVVT GQNGRLAMGR LGSLCEQVKQ LNFQGYEVIL VTSGAVGVGR QRLQYRKLIH SSFADLQNPQ
101: MNFDGKACAA VGQSGLMAIY DTLFSQLDVT SSQLLVTDRD FKDPSFGDQL RETVFALLNL KVIPLFNEND AISTRRQSDE DSSGVFWDND SLAALLAAEL
201: NADLLIMLSD VEGLYSGPPS DPQSKIIHTY VNEKHGKLIS FGEKSNVGRG GMQAKVAAAA NAASKGVPVV IASGFATDSI IKVLKGEKIG TLFHNEANLW
301: ECSKEATARE MAVAARDCSR RLQKLSSDER KKILLDIADA LEANEGAIRS ENEADVEAAQ GAGYEKSLVA RMTLKPGKIT NLARSIRAIA DMEDPISHTL
401: KRTEVAKDLV FEKAYCPLGV LLIIFESRPD ALVQIASLAI RSGNGLLLKG GKEAMRSNAI LHKVITGVIP DIVGKKLIGH VTSKDEIADL LALDDVIDLV
501: IPRGSKNLVS QIKATTKIPV LGHADGICHV YIDKSADMDM AKRIVLDAKV DYPAACNAME TLLVHKDLNK SEGLDDLLVE LEKEGVVIYG GPVAHDKLKV
601: PKVDSFRHEY SSMACTLEFV DDVQSAIDHI NRYGSAHTDC IITTDESAAE AFLQQVDSAA VFHNASTRFC DGTRFGLGAE VGISTGRIHA RGPVGVDGLL
701: TTRCILRGSG QVVNGDKGVV YTHKDLPLQ

Best Arabidopsis Sequence Match ( AT3G55610.1 )
(BLAST)

001: MTEIDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA ICEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQMEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTVAQ MLVTDSSFRD KDFRKQLSET VKAMLRMRVI PVFNENDAIS TRRAPYKDST GIFWDNDSLA ALLSLELKAD LLILLSDVEG
201: LYTGPPSDST SKLIHTFIKE KHQDEITFGE KSKLGRGGMT AKVKAAVNAA YGGVPVIITS GYAAENISKV LRGLRVGTLF HQDAHLWAPV VDTTSRDMAV
301: AARESSRKLQ ALSSEDRKQI LHDIANALEV NEKTIKAEND LDVAAAQEAG YEESLVARLV MKPGKISSLA ASVRQLAEME DPIGRVLKKT QVADDLILEK
401: TSSPIGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NSTKIPVLGH ADGICHVYVD KSGKLDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNGF LDDLIYVLQT KGVTLYGGPR ASAKLNIPET KSFHHEYSSK
601: ACTVEIVEDV YGAIDHIHQH GSAHTDCIVT EDSEVAEIFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STSRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH KDLPVLQRTE AVENGI

Arabidopsis Description

P5CSBDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VF78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.