Factsheet for GSMUA_Achr10P00530_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr8P02490_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	GSMUA_Achr10P...	AT2G39800.1	21798944
AT2G39800.1	GSMUA_Achr10P...	AT2G39800.1	21798944
AT2G39800.1	GSMUA_Achr8P02490_001	AT2G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02490_001	Banana	cytosol	71.81	29.72
PGSC0003DMT400068827	Potato	cytosol	61.41	28.96
KRH15055	Soybean	nucleus	65.77	27.49
Solyc08g043170.2.1	Tomato	plastid	66.11	27.36
KRH73083	Soybean	endoplasmic reticulum	64.77	27.07
VIT_13s0019g02360.t01	Wine grape	cytosol	64.09	26.64
Os05t0455500-02	Rice	plasma membrane	63.42	26.4
KXG22139	Sorghum	cytosol	63.42	26.4
KRG97830	Soybean	endoplasmic reticulum	63.09	26.29
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	63.09	26.22
PGSC0003DMT400068829	Potato	cytosol	62.75	26.08
TraesCS1B01G290600.2	Wheat	mitochondrion	62.08	25.84
HORVU1Hr1G072780.1	Barley	cytosol	61.74	25.7
Zm00001d038358_P002	Maize	cytosol	62.75	25.65
TraesCS1A01G281400.1	Wheat	cytosol	61.41	25.56
TraesCS1D01G280700.2	Wheat	golgi	61.07	25.42
AT2G39800.1	Thale cress	cytosol	60.4	25.1
CDY20482	Canola	cytosol	60.4	25.1
Bra005012.1-P	Field mustard	cytosol	60.4	25.1
CDY61781	Canola	cytosol	60.07	25.04
Bra000150.1-P	Field mustard	cytosol	60.07	25.04
CDY07635	Canola	cytosol	60.07	25.04
CDX74830	Canola	cytosol	60.07	24.97
Zm00001d010056_P002	Maize	cytosol	63.76	24.74
CDX76082	Canola	cytosol	59.4	24.72
KXG33696	Sorghum	cytosol	60.4	24.69
CDX93233	Canola	cytosol	59.06	24.55
Bra017051.1-P	Field mustard	cytosol	59.06	24.55
CDY40241	Canola	cytosol	59.73	24.48
Bra007179.1-P	Field mustard	cytosol	59.73	24.48
Bra014732.1-P	Field mustard	cytosol	59.06	24.48
CDY07034	Canola	cytosol	58.72	24.41
TraesCS3B01G395900.1	Wheat	cytosol	59.73	24.38
TraesCS3D01G357200.1	Wheat	cytosol	59.73	24.38
CDY41203	Canola	cytosol	59.4	24.35
Os01t0848200-02	Rice	plasma membrane	59.73	24.22
AT3G55610.1	Thale cress	cytosol	58.05	23.83
CDY65768	Canola	cytosol	58.05	23.83
TraesCS3A01G363700.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	59.73	23.3
HORVU3Hr1G085760.5	Barley	cytosol, plastid	60.4	21.79
Zm00001d012391_P003	Maize	cytosol, peroxisome, plasma membrane	52.35	20.66
GSMUA_Achr10P...	Banana	cytosol	3.36	2.98
GSMUA_Achr10P...	Banana	cytosol	1.01	2.5

Protein Annotations

KEGG:00330+2.7.2.11	KEGG:00332+2.7.2.11	Gene3D:3.40.1160.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	InterPro:AceGlu_kinase-like_sf
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_N	InterPro:Asp/Glu/Uridylate_kinase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004349
GO:GO:0005575	GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016740
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G00530_001	EnsemblPlants:GSMUA_Achr10P00530_001	EnsemblPlants:GSMUA_Achr10T00530_001	InterPro:Glu/AcGlu_kinase	InterPro:Glutamate_5-kinase_CS
InterPro:IPR016162	InterPro:IPR036393	UniProt:M0RE80	PFAM:PF00696	PRINTS:PR00474	ScanProsite:PS00902
PANTHER:PTHR11063	PANTHER:PTHR11063:SF16	SUPFAM:SSF53633	SUPFAM:SSF53720	TMHMM:TMhelix	UniParc:UPI000295471E
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G00530_001]

Coordinates

chr10:+:1120134..1127431

Molecular Weight (calculated)

33187.8 Da

IEP (calculated)

6.788

GRAVY (calculated)

0.010

Length

298 amino acids

Sequence
(BLAST)

001: MQLCQTVKSL LALKVIPVFN ENDAVSTRRA PYEDSSGIFW DNDSLAALLA LELKADLLVL LSDVEGLYSG PPGEPHSKLI HTYVKERHHG EITFGDKSRV
101: GRGGMTAKVK AAVYAAYAGT PVVITSGFTT DSIIKVVQGE RVGTLFHQDA SKWALPKEVS ARCMAVSARE CSRRLQSLSS EERKKILLDI ANALEANEKL
201: IRIENEADVS AAQQAGYEKS LISRLTLKPG KARDYEFMFF PLWQHCSYES SLTFISSLSN FMSWFKSFLP DAADSLFYYL LLSSLWSFML FAIDLFTV

Best Arabidopsis Sequence Match ( AT3G55610.2 )
(BLAST)

001: MTEIDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA ICEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQMEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTVAQ MLVTDSSFRD KDFRKQLSET VKAMLRMRVI PVFNENDAIS TRRAPYKDST GIFWDNDSLA ALLSLELKAD LLILLSDVEG
201: LYTGPPSDST SKLIHTFIKE KHQDEITFGE KSKLGRGGMT AKVKAAVNAA YGGVPVIITS GYAAENISKV LRGLRVGTLF HQDAHLWAPV VDTTSRDMAV
301: AARESSRKLQ ALSSEDRKQI LHDIANALEV NEKTIKAEND LDVAAAQEAG YEESLVARLV MKPGKISSLA ASVRQLAEME DPIGRVLKKT QVADDLILEK
401: TSSPIGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NSTKIPVLGH ADGICHVYVD KSGKLDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNGF LDDLIYVLQT KGVTLYGGPR ASAKLNIPET KSFHHEYSSK
601: ACTVEIVEDV YGAIDHIHQH GR

Arabidopsis Description

P5CSBDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VF78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.