Factsheet for TraesCS1A01G281400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G281400.1
TraesCS1B01G290600.2
TraesCS1D01G280700.2
TraesCS3A01G363700.2
TraesCS3B01G395900.1
TraesCS3D01G357200.1
TraesCS7B01G254000.2
TraesCS7D01G155200.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39800.1	TraesCS1A01G281400.1	AT2G39800.1	21798944
AT2G39800.1	TraesCS1B01G290600.2	AT2G39800.1	21798944
AT2G39800.1	TraesCS1D01G280700.2	AT2G39800.1	21798944
AT2G39800.1	TraesCS3A01G363700.2	AT2G39800.1	21798944
AT2G39800.1	TraesCS3B01G395900.1	AT2G39800.1	21798944
AT2G39800.1	TraesCS3D01G357200.1	AT2G39800.1	21798944
AT2G39800.1	TraesCS7B01G254000.2	AT5G20010.1	21798944
AT2G39800.1	TraesCS7D01G155200.2	AT5G20010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G290600.2	Wheat	mitochondrion	99.58	99.58
TraesCS1D01G280700.2	Wheat	golgi	99.02	99.02
HORVU1Hr1G072780.1	Barley	cytosol	97.63	97.63
Os05t0455500-02	Rice	plasma membrane	88.27	88.27
KXG22139	Sorghum	cytosol	86.87	86.87
Zm00001d038358_P002	Maize	cytosol	82.82	81.34
GSMUA_Achr10P...	Banana	cytosol	13.55	80.83
Zm00001d010056_P002	Maize	cytosol	85.75	79.95
KRH73083	Soybean	endoplasmic reticulum	75.98	76.3
VIT_13s0019g02360.t01	Wine grape	cytosol	76.4	76.29
KRH15055	Soybean	nucleus	75.56	75.88
KRG97830	Soybean	endoplasmic reticulum	75.0	75.1
Solyc06g019170.2.1	Tomato	nucleus, plastid, unclear	74.72	74.62
PGSC0003DMT400068829	Potato	cytosol	74.3	74.2
Solyc08g043170.2.1	Tomato	plastid	74.44	74.03
Bra005012.1-P	Field mustard	cytosol	73.46	73.36
CDX74830	Canola	cytosol	73.32	73.22
CDY20482	Canola	cytosol	73.32	73.22
PGSC0003DMT400068827	Potato	cytosol	64.53	73.1
AT2G39800.1	Thale cress	cytosol	73.04	72.94
CDX93233	Canola	cytosol	72.91	72.8
CDY07034	Canola	cytosol	72.77	72.66
CDX76082	Canola	cytosol	72.63	72.63
Bra014732.1-P	Field mustard	cytosol	72.77	72.46
Bra000150.1-P	Field mustard	cytosol	72.35	72.45
CDY07635	Canola	cytosol	72.35	72.45
CDY61781	Canola	cytosol	72.21	72.31
Bra017051.1-P	Field mustard	cytosol	72.35	72.25
CDY41203	Canola	cytosol	73.04	71.94
Bra007179.1-P	Field mustard	cytosol	72.91	71.8
CDY40241	Canola	cytosol	72.91	71.8
AT3G55610.1	Thale cress	cytosol	72.63	71.63
CDY65768	Canola	cytosol	72.21	71.21
TraesCS3A01G363700.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	74.86	70.16
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.56	61.41

Protein Annotations

KEGG:00330+1.2.1.41	KEGG:00330+2.7.2.11	KEGG:00330+2.7.2.11+1.2.1.41	KEGG:00332+1.2.1.41	KEGG:00332+2.7.2.11	KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.1.1.1.4.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	InterPro:Asp/Glu/Uridylate_kinase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004349	GO:GO:0004350	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016491	GO:GO:0016620	GO:GO:0016740	GO:GO:0055114	InterPro:GPR_dom	InterPro:Glu/AcGlu_kinase
InterPro:Glu_5kinase/COase_Synthase	InterPro:Glutamate_5-kinase_CS	InterPro:IPR016162	InterPro:IPR016163	InterPro:IPR036393	HAMAP:MF_00412
HAMAP:MF_00456	InterPro:P5_carboxy_syn	PFAM:PF00171	PFAM:PF00696	PIRSF:PIRSF036429	PRINTS:PR00474
ScanProsite:PS00902	PANTHER:PTHR11063	PANTHER:PTHR11063:SF16	SUPFAM:SSF53633	SUPFAM:SSF53720	TIGRFAMs:TIGR00407
TIGRFAMs:TIGR01027	TIGRFAMs:TIGR01092	EnsemblPlantsGene:TraesCS1A01G281400	EnsemblPlants:TraesCS1A01G281400.1	TIGR:cd04256	TIGR:cd07079
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:479827961..479840208

Molecular Weight (calculated)

77683.7 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.064

Length

716 amino acids

Sequence
(BLAST)

001: MAGADPNRSF MKDVKRIIIK VGTAVITRND GRLALGRIGA LCEQVKDLNA QGYEVIMVTS GAVGVGRQRL RYRKLVNSSF ADLQKPQMEL DGKACAAVGQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFDN SNFRERLRET VESLLELRVI PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLALELKAD LLVLLSDVDG
201: LYSGPPSEPS SKLIHTYIKE KHYHEITFGD KSRVGRGGMT AKVQAAVWAS TGGVPVVITS GCASQSLVKV LRGEKIGTLF HKNASLWEPS KDTSVREMAV
301: AARDCSRHLQ NLSSEERKKI LLDVADALEA NEDLIRSENE ADLAAAHEAG YESALVSRLT LKPGKIASLA KSVRTLANME DPINEILKRT EVADGLVLEK
401: TSCPLGVLLI IFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNAILHK VITNAIPDNV GEKLIGLITT RDEIADLLKH DDVIDLVIPR GSNKLVAQIK
501: SSTKIPVLGH ADGVCHVYID KSADMDMAKR IVMDAKIDYP AACNAMETLL VHKDLMKIPE LNDILVALKT AGVNLYCGPV AHKVLGYPKA DSLHLEYSSM
601: ACTVEIVDDV QSAIDHIHRY GSAHTDCVVT TDDKVAETFL RQVDSAAVLY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WLLRGKGQVV
701: NGDKDVEYTH KSLPLQ

Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)

001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA

Arabidopsis Description

P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.