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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01060
KXG22139
KXG22580
KXG32999
KXG33696

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 KXG22139 AT2G39800.1 21798944
AT2G39800.1 KXG33696 AT2G39800.1 21798944
AT2G39800.1 EES01060 AT5G20010.1 21798944
AT2G39800.1 KXG22580 AT5G20010.1 21798944
AT2G39800.1 KXG32999 AT5G20010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038358_P002 Maize cytosol 90.78 89.16
Os05t0455500-02 Rice plasma membrane 88.41 88.41
Zm00001d010056_P002 Maize cytosol 93.85 87.5
TraesCS1B01G290600.2 Wheat mitochondrion 86.87 86.87
TraesCS1A01G281400.1 Wheat cytosol 86.87 86.87
HORVU1Hr1G072780.1 Barley cytosol 86.73 86.73
TraesCS1D01G280700.2 Wheat golgi 86.59 86.59
GSMUA_Achr10P... Banana cytosol 13.41 80.0
KRH73083 Soybean endoplasmic reticulum 77.09 77.42
KRH15055 Soybean nucleus 76.96 77.28
VIT_13s0019g02360.t01 Wine grape cytosol 76.82 76.71
KXG33696 Sorghum cytosol 77.37 75.99
KRG97830 Soybean endoplasmic reticulum 75.28 75.38
Solyc08g043170.2.1 Tomato plastid 75.0 74.58
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 74.44 74.34
PGSC0003DMT400068829 Potato cytosol 74.44 74.34
CDY07034 Canola cytosol 73.74 73.64
Bra000150.1-P Field mustard cytosol 73.46 73.57
CDY07635 Canola cytosol 73.46 73.57
CDX93233 Canola cytosol 73.6 73.5
Bra005012.1-P Field mustard cytosol 73.6 73.5
CDX74830 Canola cytosol 73.6 73.5
AT2G39800.1 Thale cress cytosol 73.6 73.5
CDY20482 Canola cytosol 73.6 73.5
CDY61781 Canola cytosol 73.18 73.29
Bra017051.1-P Field mustard cytosol 73.32 73.22
CDX76082 Canola cytosol 73.18 73.18
PGSC0003DMT400068827 Potato cytosol 64.53 73.1
Bra014732.1-P Field mustard cytosol 73.04 72.74
AT3G55610.1 Thale cress cytosol 73.04 72.04
CDY41203 Canola cytosol 73.04 71.94
Bra007179.1-P Field mustard cytosol 73.04 71.94
CDY40241 Canola cytosol 72.91 71.8
CDY65768 Canola cytosol 72.49 71.49
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 26.4 63.42
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1UniProt:A0A1B6P8T3InterPro:AceGlu_kinase-like_sf
InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinaseInterPro:G-glutamylP_reductase_CS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004349GO:GO:0004350GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006561
GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114GO:GO:0055129
InterPro:GPR_domInterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163
InterPro:IPR036393ProteinID:KXG22138.1EnsemblPlants:KXG22139ProteinID:KXG22139ProteinID:KXG22139.1HAMAP:MF_00412
HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474
ScanProsite:PS00902ScanProsite:PS01223PANTHER:PTHR11063PANTHER:PTHR11063:SF13MetaCyc:PWY-3341MetaCyc:PWY-6922
EnsemblPlantsGene:SORBI_3009G160100SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092
UniParc:UPI00081AC32FSEG:seg::::
Description
hypothetical protein
Coordinates
chr9:-:51779375..51787129
Molecular Weight (calculated)
77747.7 Da
IEP (calculated)
6.378
GRAVY (calculated)
-0.046
Length
716 amino acids
Sequence
(BLAST)
001: MATADRTRSF MKDVKRVIIK VGTAVVTRHD GRLALGRLGA LCEQVKELNA LGYEVIIVTS GAVGVGKQRL KYRKLVNSSF ADLQKPQMEL DGKACAAVGQ
101: SGLMALYDML FTQLDVSSSQ LLVTDSDFEN PNFRERLRET VESLLDLKVV PIFNENDAIS TRKAPYEDSS GIFWDNDSLA GLLAIELKAD LLVLLSDVDG
201: LYSGPPSEPQ SKIIHTYIKE KHHNEITFGD KSRVGRGGMT AKVKAAFVAS NSGTPVVITS GFASQSIVRV LQGEKIGTLF HKDASLWEPS KDVSAREMAL
301: GARESSRRLQ NLSSDERKKI LLDVADALEE NVDLIRTENE IDVSAAQEAG YEPSLVARLT LKPGKIASLA KSIRTLAYME DPINQIIKRT EVAEDLVLEK
401: TSCPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE AMRSNTILHK VITSAIPSNV GEKLIGLVTS RDEIADLLKL DDVIDLVIPR GSNKLVSQIK
501: SSTKIPVLGH ADGICHVYID KSADMNMAKR IVLDAKIDYP AACNAMETLL VHKDLINAPG LDDLLLALKT EGVAIYGGPV AHELLCIPKA DSLHHEYSSM
601: ACTIEFVDDV QSAIDHIHRY GSAHTDCIVT TDDKVAETFL RQVDSAAVFY NASTRFSDGA RFGLGAEVGI STGRIHARGP VGVEGLLTTR WIMRGSGQVV
701: NGDKDIAYTH KNLPLQ
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.