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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000150.1-P
Bra005012.1-P
Bra017051.1-P
Bra036356.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39800.1 Bra000150.1-P AT2G39800.1 21798944
AT2G39800.1 Bra005012.1-P AT2G39800.1 21798944
AT2G39800.1 Bra017051.1-P AT2G39800.1 21798944
AT2G39800.1 Bra036356.1-P AT3G25930.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07034 Canola cytosol 99.44 99.44
Bra005012.1-P Field mustard cytosol 95.82 95.82
AT2G39800.1 Thale cress cytosol 94.28 94.28
Bra000150.1-P Field mustard cytosol 93.31 93.57
Bra007179.1-P Field mustard cytosol 87.17 85.97
Bra014732.1-P Field mustard cytosol 85.08 84.84
KRH73083 Soybean endoplasmic reticulum 76.57 77.0
KRH15055 Soybean nucleus 76.01 76.44
KRG97830 Soybean endoplasmic reticulum 75.73 75.94
VIT_13s0019g02360.t01 Wine grape cytosol 75.31 75.31
Solyc08g043170.2.1 Tomato plastid 75.17 74.86
PGSC0003DMT400068829 Potato cytosol 74.76 74.76
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 74.76 74.76
Os05t0455500-02 Rice plasma membrane 74.06 74.16
KXG22139 Sorghum cytosol 73.22 73.32
PGSC0003DMT400068827 Potato cytosol 64.3 72.94
GSMUA_Achr8P02490_001 Banana cytosol 72.8 72.5
GSMUA_Achr10P... Banana cytosol 12.13 72.5
HORVU1Hr1G072780.1 Barley cytosol 72.25 72.35
TraesCS1A01G281400.1 Wheat cytosol 72.25 72.35
TraesCS1D01G280700.2 Wheat golgi 72.11 72.21
TraesCS1B01G290600.2 Wheat mitochondrion 72.11 72.21
Zm00001d038358_P002 Maize cytosol 70.85 69.68
KXG33696 Sorghum cytosol 68.9 67.76
TraesCS3B01G395900.1 Wheat cytosol 68.9 67.67
TraesCS3D01G357200.1 Wheat cytosol 68.9 67.67
Os01t0848200-02 Rice plasma membrane 69.04 67.35
Zm00001d010056_P002 Maize cytosol 71.97 67.19
TraesCS3A01G363700.2 Wheat endoplasmic reticulum, golgi, plasma membrane 67.5 63.35
Zm00001d012391_P003 Maize cytosol, peroxisome, plasma membrane 63.88 60.66
HORVU3Hr1G085760.5 Barley cytosol, plastid 69.46 60.29
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 24.55 59.06
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinaseEnsemblPlantsGene:Bra017051EnsemblPlants:Bra017051.1
EnsemblPlants:Bra017051.1-PInterPro:G-glutamylP_reductase_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004349
GO:GO:0004350GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006561GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009058
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016491GO:GO:0016620GO:GO:0016740
GO:GO:0055114GO:GO:0055129InterPro:GPR_domInterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CS
InterPro:IPR016162InterPro:IPR016163InterPro:IPR036393UniProt:M4DKM0HAMAP:MF_00412HAMAP:MF_00456
InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696PIRSF:PIRSF036429PRINTS:PR00474ScanProsite:PS00902
ScanProsite:PS01223PANTHER:PTHR11063PANTHER:PTHR11063:SF16SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407
TIGRFAMs:TIGR01027TIGRFAMs:TIGR01092UniParc:UPI0002544D67SEG:seg::
Description
AT2G39800 (E=0.0) P5CS1, ATP5CS | P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1); delta1-pyrroline-5-carboxylate synthetase
Coordinates
chrA04:-:16902045..16906338
Molecular Weight (calculated)
77653.2 Da
IEP (calculated)
5.896
GRAVY (calculated)
-0.090
Length
717 amino acids
Sequence
(BLAST)
001: MEELDRSRAF AKDVKRIVVK VGTGVVTGKS GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQSEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLGNDSSFRD KEFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLGLELKAD LLIILSDVEG
201: LYTGPPSDPD SKLIHTFIKE KHQDEITFGD KSRLGRGGMT AKVKAAMNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPV TDSNARDMAV
301: AARESSRKLQ ALSSEDRRQI LYSVADALEA NEKTIRDENE LDVAAAQEAG LEESLVARLV MTPAKIMSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NTTKIPVLGH ADGICHVYID KACNLDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFAIQS NGVTLYGGPR ASAILNIPEA RSFKHEYCSK
601: SCTVEVVDDV HGAIDHIHGH GSAHTDCIVT EDPEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STGRIHARGP VGVEGLLTTR WIMRGNGQVV
701: DGDNGIAYTH QDIPIQA
Best Arabidopsis Sequence Match ( AT2G39800.1 )
(BLAST)
001: MEELDRSRAF ARDVKRIVVK VGTAVVTGKG GRLALGRLGA LCEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQTEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTAAQ LLVNDSSFRD KDFRKQLNET VKSMLDLRVI PIFNENDAIS TRRAPYQDSS GIFWDNDSLA ALLALELKAD LLILLSDVEG
201: LYTGPPSDPN SKLIHTFVKE KHQDEITFGD KSRLGRGGMT AKVKAAVNAA YAGIPVIITS GYSAENIDKV LRGLRVGTLF HQDARLWAPI TDSNARDMAV
301: AARESSRKLQ ALSSEDRKKI LLDIADALEA NVTTIKAENE LDVASAQEAG LEESMVARLV MTPGKISSLA ASVRKLADME DPIGRVLKKT EVADGLVLEK
401: TSSPLGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVTQIK
501: NTTKIPVLGH ADGICHVYVD KACDTDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNAV LNELIFALQS NGVTLYGGPR ASKILNIPEA RSFNHEYCAK
601: ACTVEVVEDV YGAIDHIHRH GSAHTDCIVT EDHEVAELFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGV STGRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH QDIPIQA
Arabidopsis Description
P5CSADelta-1-pyrroline-5-carboxylate synthase A [Source:UniProtKB/Swiss-Prot;Acc:P54887]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.