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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40241 Canola cytosol 99.45 99.45
Bra007179.1-P Field mustard cytosol 99.31 99.31
CDX76082 Canola cytosol 92.3 93.72
CDY65768 Canola cytosol 93.4 93.53
AT3G55610.1 Thale cress cytosol 93.26 93.39
CDY20482 Canola cytosol 88.31 89.54
CDX74830 Canola cytosol 88.03 89.26
CDX93233 Canola cytosol 86.8 88.01
CDY07635 Canola cytosol 86.11 87.55
CDY07034 Canola cytosol 86.24 87.45
CDY61781 Canola cytosol 85.69 87.13
KRH73083 Soybean endoplasmic reticulum 76.48 77.98
KRH15055 Soybean nucleus 76.34 77.84
VIT_13s0019g02360.t01 Wine grape cytosol 76.2 77.27
KRG97830 Soybean endoplasmic reticulum 75.52 76.78
Solyc06g019170.2.1 Tomato nucleus, plastid, unclear 74.83 75.87
PGSC0003DMT400068829 Potato cytosol 74.69 75.73
GSMUA_Achr8P02490_001 Banana cytosol 74.28 75.0
Solyc08g043170.2.1 Tomato plastid 74.28 75.0
Os05t0455500-02 Rice plasma membrane 73.31 74.44
PGSC0003DMT400068827 Potato cytosol 64.65 74.37
KXG22139 Sorghum cytosol 71.94 73.04
TraesCS1A01G281400.1 Wheat cytosol 71.94 73.04
TraesCS1B01G290600.2 Wheat mitochondrion 71.8 72.91
TraesCS1D01G280700.2 Wheat golgi 71.66 72.77
HORVU1Hr1G072780.1 Barley cytosol 71.66 72.77
GSMUA_Achr10P... Banana cytosol 11.83 71.67
Zm00001d038358_P002 Maize cytosol 70.01 69.82
KXG33696 Sorghum cytosol 69.19 69.0
TraesCS3B01G395900.1 Wheat cytosol 69.05 68.77
TraesCS3D01G357200.1 Wheat cytosol 69.05 68.77
Os01t0848200-02 Rice plasma membrane 69.05 68.3
Zm00001d010056_P002 Maize cytosol 71.11 67.32
TraesCS3A01G363700.2 Wheat endoplasmic reticulum, golgi, plasma membrane 67.68 64.4
Zm00001d012391_P003 Maize cytosol, peroxisome, plasma membrane 63.41 61.06
HORVU3Hr1G085760.5 Barley cytosol, plastid 69.19 60.9
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 24.35 59.4
Protein Annotations
KEGG:00330+1.2.1.41KEGG:00330+2.7.2.11KEGG:00330+2.7.2.11+1.2.1.41KEGG:00332+1.2.1.41KEGG:00332+2.7.2.11KEGG:00332+2.7.2.11+1.2.1.41
Gene3D:3.40.1160.10Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.1.1.1.4.1.1GO:A0A078HWQ9UniProt:A0A078HWQ9
InterPro:AceGlu_kinase-like_sfInterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_NInterPro:Aldehyde_DH_domInterPro:Asp/Glu/Uridylate_kinase
EnsemblPlants:CDY41203ProteinID:CDY41203ProteinID:CDY41203.1ncoils:CoilInterPro:G-glutamylP_reductase_CSGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004349GO:GO:0004350GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006561GO:GO:0008150
GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016491GO:GO:0016620GO:GO:0016740GO:GO:0055114GO:GO:0055129InterPro:GPR_dom
EnsemblPlantsGene:GSBRNA2T00072614001InterPro:Glu/AcGlu_kinaseInterPro:Glu_5kinase/COase_SynthaseInterPro:Glutamate_5-kinase_CSInterPro:IPR016162InterPro:IPR016163
InterPro:IPR036393HAMAP:MF_00412HAMAP:MF_00456InterPro:P5_carboxy_synPFAM:PF00171PFAM:PF00696
PIRSF:PIRSF036429PRINTS:PR00474ScanProsite:PS00902ScanProsite:PS01223PANTHER:PTHR11063PANTHER:PTHR11063:SF16
MetaCyc:PWY-3341MetaCyc:PWY-6922SUPFAM:SSF53633SUPFAM:SSF53720TIGRFAMs:TIGR00407TIGRFAMs:TIGR01027
TIGRFAMs:TIGR01092UniPathway:UPA00098UniParc:UPI0004EEC540SEG:seg::
Description
BnaC08g26550DDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A078HWQ9]
Coordinates
chrLK032493:+:45864..50343
Molecular Weight (calculated)
78711.0 Da
IEP (calculated)
7.168
GRAVY (calculated)
-0.095
Length
727 amino acids
Sequence
(BLAST)
001: MEEEIDRSRA FAKDVKRIVV KVGTAVVTGK GGRLALGRLG AICEQLAELN SDGFEVILVS SGAVGLGRQR LRYRQLVNSS FADLQKPQTE LDGKACAGVG
101: QSSLMAYYET MFDQMDVTVA QMLVTDSSFR DKDFRKQLSE TVKAMLKMRV IPVFNENDAI STRKAPYKDS TGIFWDNDSL AALLALELKA DLLILLSDVE
201: GLYTGPPSDP KSKLIHTYVK EKHQEEITFG EKSRLGRGGM TAKVKAAVNA AYGGIPVIIT SGYAAENIAK VLKGLRVGTL FHQDAHLWAR VVDTTSRDMA
301: VAARESSRKL QALSSEDRKN ILLDIATALE ANEKIIKAEN DLDVAAAQEA GYEESLVARL VMKPGKISSL AASIRQLAEM EDPIGRVLKK TEVADGLILE
401: KTSSPLGVLL IVFESRPDAL VQIASLAIRS GNGLLLKGGK EARRSNAILH KVITDAIPKT VGGKLIGLVT SRDEIPDLLK LDDVIDLVIP RGSNKLVSQI
501: KNSTKIPVLG HADGICHVYV DKSCKVDMAK RVVSDAKLDY PAACNAMETL LVHKDLEQNG VLNELIYALQ ANGVTLYGGP KASGKLNIPE AKSFHHEYSS
601: KACTVEIVED VHGAIDHIHQ HGSAHTDCIV TEDSEVAEIF LRQVDSAAVI HNASTRFCDG FRFGLGAEVG ISTSRIHARG PVGVEGLLTT RWIMRGKGQV
701: VDGDNGVAYT HKDLPVLERT KAVENGH
Best Arabidopsis Sequence Match ( AT3G55610.1 )
(BLAST)
001: MTEIDRSRAF AKDVKRIVVK VGTAVVTGKG GRLALGRLGA ICEQLAELNS DGFEVILVSS GAVGLGRQRL RYRQLVNSSF ADLQKPQMEL DGKACAGVGQ
101: SSLMAYYETM FDQLDVTVAQ MLVTDSSFRD KDFRKQLSET VKAMLRMRVI PVFNENDAIS TRRAPYKDST GIFWDNDSLA ALLSLELKAD LLILLSDVEG
201: LYTGPPSDST SKLIHTFIKE KHQDEITFGE KSKLGRGGMT AKVKAAVNAA YGGVPVIITS GYAAENISKV LRGLRVGTLF HQDAHLWAPV VDTTSRDMAV
301: AARESSRKLQ ALSSEDRKQI LHDIANALEV NEKTIKAEND LDVAAAQEAG YEESLVARLV MKPGKISSLA ASVRQLAEME DPIGRVLKKT QVADDLILEK
401: TSSPIGVLLI VFESRPDALV QIASLAIRSG NGLLLKGGKE ARRSNAILHK VITDAIPETV GGKLIGLVTS REEIPDLLKL DDVIDLVIPR GSNKLVSQIK
501: NSTKIPVLGH ADGICHVYVD KSGKLDMAKR IVSDAKLDYP AACNAMETLL VHKDLEQNGF LDDLIYVLQT KGVTLYGGPR ASAKLNIPET KSFHHEYSSK
601: ACTVEIVEDV YGAIDHIHQH GSAHTDCIVT EDSEVAEIFL RQVDSAAVFH NASTRFSDGF RFGLGAEVGI STSRIHARGP VGVEGLLTTR WIMRGKGQVV
701: DGDNGIVYTH KDLPVLQRTE AVENGI
Arabidopsis Description
P5CSBDelta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VF78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.