Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74957 | Soybean | cytosol | 51.23 | 50.3 |
| KRH70829 | Soybean | cytosol | 50.93 | 50.0 |
| VIT_01s0113g00430.t01 | Wine grape | cytosol | 50.0 | 49.54 |
| Zm00001d034081_P002 | Maize | cytosol, mitochondrion | 44.75 | 48.17 |
| Solyc05g012720.2.1 | Tomato | nucleus | 41.05 | 47.84 |
| PGSC0003DMT400072830 | Potato | cytosol | 47.53 | 47.38 |
| TraesCS5A01G396600.1 | Wheat | mitochondrion | 45.99 | 46.27 |
| TraesCS5B01G401600.1 | Wheat | mitochondrion | 45.68 | 45.96 |
| TraesCS5D01G406300.1 | Wheat | mitochondrion | 45.68 | 45.96 |
| OQU90950 | Sorghum | mitochondrion | 45.68 | 45.82 |
| CDY28548 | Canola | cytosol | 44.44 | 45.71 |
| AT1G69400.1 | Thale cress | cytosol | 43.52 | 44.9 |
| CDY44065 | Canola | cytosol | 43.52 | 44.76 |
| HORVU5Hr1G096830.5 | Barley | mitochondrion | 43.21 | 43.48 |
| Os03t0758700-01 | Rice | endoplasmic reticulum, plasma membrane | 33.02 | 36.39 |
| GSMUA_Achr4P10920_001 | Banana | cytosol | 38.27 | 36.26 |
| Bra038307.1-P | Field mustard | plastid | 41.05 | 35.19 |
| GSMUA_Achr6P30360_001 | Banana | cytosol, plastid | 24.38 | 21.35 |
| GSMUA_Achr6P30400_001 | Banana | cytosol, plastid | 24.07 | 21.08 |
| GSMUA_Achr4P03390_001 | Banana | extracellular | 25.31 | 19.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P09460_001 | EnsemblPlants:GSMUA_Achr9T09460_001 | EnsemblPlantsGene:GSMUA_Achr9G09460_001 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR10971 | PANTHER:PTHR10971:SF17 | PFscan:PS50082 | PFscan:PS50294 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0002954027 | UniProt:M0TYV5 | MapMan:13.3.5.5.2 | : |
Description
Putative Mitotic checkpoint protein bub3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G09460_001]
Coordinates
chr9:+:6152701..6157855
Molecular Weight (calculated)
35877.5 Da
IEP (calculated)
5.986
GRAVY (calculated)
-0.140
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGARVQLGE PIGDAVSRIR FAPGSNNLLI SSWDSVLRVF DVDGCVLRVR APSDGALLDC CFEDEKAALS ASSDGCIRRY DFCSETQTIV GNHDDSVTFI
101: DHSKETGQFI SAGLDKKLMF WDLHMKNGHA GCTQVVYSDI WSISLCQTYL VAVVGKQINV YDLRNLRVPV QIKESSMSYQ IRCVRSFSSC EGYASGSVDG
201: CVALEYFDPS KSHEMGCVFR CHPKSKSGRC HLVTVNDIGF HPCSDTFVTG DNEGYAIIWD IQSKKRLYEL PRYPCSVASL SYNHSGQLLA VSSGCIYQEA
301: REVEEAPQIF IHAMENIAKP SRLS
101: DHSKETGQFI SAGLDKKLMF WDLHMKNGHA GCTQVVYSDI WSISLCQTYL VAVVGKQINV YDLRNLRVPV QIKESSMSYQ IRCVRSFSSC EGYASGSVDG
201: CVALEYFDPS KSHEMGCVFR CHPKSKSGRC HLVTVNDIGF HPCSDTFVTG DNEGYAIIWD IQSKKRLYEL PRYPCSVASL SYNHSGQLLA VSSGCIYQEA
301: REVEEAPQIF IHAMENIAKP SRLS
001: MSGDRLEFEN PIEDAVSRLR FSPQSNNLLV ASWDSYLRLY DVESSSLSLE LNSQAALLDC CFENESTSFT SGSDGFIRRY DLNAGTVDTI GRHDDISTSI
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL
Arabidopsis Description
BUB3.3Mitotic checkpoint protein BUB3.3 [Source:UniProtKB/Swiss-Prot;Acc:F4I241]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.