Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74957 | Soybean | cytosol | 94.24 | 94.24 |
| VIT_01s0113g00430.t01 | Wine grape | cytosol | 54.24 | 54.74 |
| PGSC0003DMT400072830 | Potato | cytosol | 53.03 | 53.85 |
| AT1G69400.1 | Thale cress | cytosol | 49.09 | 51.59 |
| Solyc05g012720.2.1 | Tomato | nucleus | 43.33 | 51.44 |
| GSMUA_Achr9P09460_001 | Banana | cytosol | 50.0 | 50.93 |
| CDY28548 | Canola | cytosol | 46.67 | 48.89 |
| CDY44065 | Canola | cytosol | 46.06 | 48.25 |
| HORVU5Hr1G096830.5 | Barley | mitochondrion | 43.33 | 44.41 |
| TraesCS5D01G406300.1 | Wheat | mitochondrion | 43.33 | 44.41 |
| TraesCS5B01G401600.1 | Wheat | mitochondrion | 43.33 | 44.41 |
| TraesCS5A01G396600.1 | Wheat | mitochondrion | 43.33 | 44.41 |
| OQU90950 | Sorghum | mitochondrion | 42.42 | 43.34 |
| Zm00001d034081_P002 | Maize | cytosol, mitochondrion | 39.39 | 43.19 |
| Bra038307.1-P | Field mustard | plastid | 44.24 | 38.62 |
| KRH35682 | Soybean | nucleus | 36.67 | 35.59 |
| KRG91092 | Soybean | nucleus | 36.36 | 35.29 |
| KRG91104 | Soybean | nucleus | 36.67 | 35.17 |
| KRH35672 | Soybean | cytosol | 13.03 | 32.82 |
| Os03t0758700-01 | Rice | endoplasmic reticulum, plasma membrane | 29.09 | 32.65 |
| KRH43922 | Soybean | nucleus | 24.24 | 23.05 |
| KRH10504 | Soybean | cytosol, plastid | 23.94 | 22.77 |
| KRH71020 | Soybean | cytosol, plastid | 23.33 | 22.19 |
| KRH75181 | Soybean | nucleus | 23.03 | 21.9 |
Protein Annotations
| MapMan:13.3.5.5.2 | Gene3D:2.130.10.10 | EMBL:ACUP02000809 | EnsemblPlantsGene:GLYMA_02G112500 | GO:GO:0000776 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0007049 | GO:GO:0007094 | GO:GO:0008150 | GO:GO:0009524 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0033597 | GO:GO:0043130 | GO:GO:1990298 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | UniProt:K7K7Q8 | EnsemblPlants:KRH70829 | ProteinID:KRH70829 | ProteinID:KRH70829.1 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR10971 | PANTHER:PTHR10971:SF17 | SMART:SM00320 | SUPFAM:SSF50978 |
| UniParc:UPI0002967018 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
Description
hypothetical protein
Coordinates
chr2:-:10910957..10917858
Molecular Weight (calculated)
36561.0 Da
IEP (calculated)
5.952
GRAVY (calculated)
-0.225
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGNWSELEL EKEFGDAISR TRFAPHSNNL LISSWDSNLR LYDVDASLLR LQAPSQAPLL DCCFQDDAVA FAAASDGLIR RYDLHSGLVD TVGRHDDMAM
101: FIGYSNETCQ LVTSGFDKKL LLWDMHTKKT SLCLRSLDAE VDSMSVSGFN VTIAIGASMH VYDLRYFDQP VESKEAFNGT HLRCVSSIPD AEGFAVGSVD
201: GRVSLQISYP SGSDEIRYIF RCHPKSKDGR HYLVSVNDIA FSPLVSGAFA TGDNEGYVTI WDAGSRRRLV ELPRYPNSVA SLSYNHTGQL LAVASSHTYQ
301: EAKEIEKPPR IFIHRVDSID IGSISASKRS
101: FIGYSNETCQ LVTSGFDKKL LLWDMHTKKT SLCLRSLDAE VDSMSVSGFN VTIAIGASMH VYDLRYFDQP VESKEAFNGT HLRCVSSIPD AEGFAVGSVD
201: GRVSLQISYP SGSDEIRYIF RCHPKSKDGR HYLVSVNDIA FSPLVSGAFA TGDNEGYVTI WDAGSRRRLV ELPRYPNSVA SLSYNHTGQL LAVASSHTYQ
301: EAKEIEKPPR IFIHRVDSID IGSISASKRS
001: MSGDRLEFEN PIEDAVSRLR FSPQSNNLLV ASWDSYLRLY DVESSSLSLE LNSQAALLDC CFENESTSFT SGSDGFIRRY DLNAGTVDTI GRHDDISTSI
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL
Arabidopsis Description
BUB3.3Mitotic checkpoint protein BUB3.3 [Source:UniProtKB/Swiss-Prot;Acc:F4I241]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.