CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 2
extracellular 3
plastid 1
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77782	Soybean	endoplasmic reticulum	94.41	94.41
VIT_16s0039g01660.t01	Wine grape	endoplasmic reticulum, extracellular	68.01	68.01
AT1G65020.1	Thale cress	extracellular, vacuole	67.08	67.71
CDY39295	Canola	endoplasmic reticulum	63.66	64.06
Bra022499.1-P	Field mustard	endoplasmic reticulum, vacuole	63.35	63.95
Bra004108.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	62.73	63.32
CDY07441	Canola	cytosol	62.42	63.01
CDY16384	Canola	endoplasmic reticulum, extracellular	63.35	62.01
Solyc03g097180.2.1	Tomato	extracellular	59.94	60.5
CDX91528	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.59	60.47
PGSC0003DMT400008203	Potato	mitochondrion	59.63	60.19
GSMUA_Achr5P03470_001	Banana	extracellular	25.16	53.64
GSMUA_Achr4P27310_001	Banana	endoplasmic reticulum, golgi	52.17	52.34
CDX91527	Canola	endoplasmic reticulum, vacuole	8.07	52.0
Zm00001d030091_P001	Maize	extracellular, golgi	52.17	51.22
EER91872	Sorghum	endoplasmic reticulum, golgi	51.55	50.61
TraesCS1A01G194800.1	Wheat	golgi	50.62	50.15
TraesCS1B01G209600.1	Wheat	endoplasmic reticulum, extracellular	50.62	50.15
TraesCS1D01G198400.1	Wheat	endoplasmic reticulum, golgi	50.31	49.85
Os10t0577000-02	Rice	endoplasmic reticulum, golgi	49.38	48.48
GSMUA_Achr5P03480_001	Banana	nucleus	28.26	44.83
HORVU6Hr1G058250.1	Barley	cytosol	45.03	44.48

Protein Annotations

EMBL:ACUP02006731	EnsemblPlants:KRH27693	EnsemblPlantsGene:GLYMA_11G009300	EntrezGene:100805402	InterPro:IPR011528	InterPro:NERD
PANTHER:PTHR35287	PFAM:PF08378	PFscan:PS50965	ProteinID:KRH27693	ProteinID:KRH27693.1	ProteinID:KRH27694.1
UniParc:UPI000233C69B	UniProt:I1LFX7	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:646479..650889

Molecular Weight (calculated)

36587.2 Da

IEP (calculated)

8.884

GRAVY (calculated)

-0.266

Length

322 amino acids

Sequence
(BLAST)

001: MWLEIIFGLV IYRLFRRFFY DDDVLDIEGS DSSALFSVAD RLKKLYGANV YVGLRIPDAD TASRQSIDMV LLTKQELWVI SVKNFSGILT IGGDGCWVCE
101: KPDKHKAERH PDPVEEARKQ ASILQSYLEQ RGVALPEGYI SCKVILPNPK LCTVPADGFP SEVITHDQWT RLKPEPKSML SSWVKGAFRS GKKDMQESVN
201: QNLDFVLCSA PIWDRVQLKG NKYVLGEFLE FKGKQEDVEA LRHIRRSKVG RIIIQKTSMF GLAPSRLQVL YSLRDYRTEG ASEPEWKEVT VRSSTEIVFQ
301: PENASKVRKF KLSSVSSMLL SA

Best Arabidopsis Sequence Match ( AT1G65020.1 )
(BLAST)

001: MWIEIICGLV IYKLVRRFFY DDEFSDVETS DSTALFSVAH RLEKLYGGKA YVGLRIPDAD TASRQDIDVV LVTKGDVVVI SVKNLSGIVT VTSDGSWVCE
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA

Arabidopsis Description

At1g65020 [Source:UniProtKB/TrEMBL;Acc:Q5XF12]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.