Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G198400.1 | Wheat | endoplasmic reticulum, golgi | 81.6 | 81.85 |
| TraesCS1B01G209600.1 | Wheat | endoplasmic reticulum, extracellular | 80.98 | 81.23 |
| TraesCS1A01G194800.1 | Wheat | golgi | 80.37 | 80.62 |
| EER91872 | Sorghum | endoplasmic reticulum, golgi | 69.02 | 68.6 |
| Zm00001d030091_P001 | Maize | extracellular, golgi | 68.71 | 68.29 |
| Os10t0577000-02 | Rice | endoplasmic reticulum, golgi | 68.4 | 67.99 |
| GSMUA_Achr4P27310_001 | Banana | endoplasmic reticulum, golgi | 51.23 | 52.02 |
| Solyc03g097180.2.1 | Tomato | extracellular | 44.79 | 45.77 |
| PGSC0003DMT400008203 | Potato | mitochondrion | 44.17 | 45.14 |
| KRH27693 | Soybean | endoplasmic reticulum, extracellular | 44.48 | 45.03 |
| AT1G65020.1 | Thale cress | extracellular, vacuole | 43.87 | 44.83 |
| GSMUA_Achr5P03470_001 | Banana | extracellular | 20.55 | 44.37 |
| KRH77782 | Soybean | endoplasmic reticulum | 43.56 | 44.1 |
| VIT_16s0039g01660.t01 | Wine grape | endoplasmic reticulum, extracellular | 43.56 | 44.1 |
| Bra004108.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 42.33 | 43.26 |
| Bra022499.1-P | Field mustard | endoplasmic reticulum, vacuole | 42.02 | 42.95 |
| CDY03064 | Canola | endoplasmic reticulum | 6.13 | 26.67 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G058250.1 | EnsemblPlantsGene:HORVU6Hr1G058250 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR011528 | InterPro:NERD | PANTHER:PTHR35287 |
| PFAM:PF08378 | PFscan:PS50965 | SEG:seg | UniParc:UPI000B47183C | UniProt:A0A287UAQ6 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr6H:-:380855149..380858870
Molecular Weight (calculated)
32729.7 Da
IEP (calculated)
10.262
GRAVY (calculated)
-0.369
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: IKQPIMDGVE QRRTPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL YGGRCFVGLR IPDPDAGARQ HVDVVLVTKR EVMVVLINNL SGFVEVDKDG
101: NWYTEKKHKQ EVIPNPVLEV SRIAANLQSY LEQRGATLPN GIVNGRVVLP NPNCRPSYTI NLQPEVISYD QWKDIKADTK GGLSTWIKGA FHGNKSDIQD
201: SLLQNLYSIL STSPMWDRLE LRGDKNVLGE FMEFKGKHED MPLLKKLKRS KVSRFIIQKS TLFGGFGRSR VQILYSPRDY RAEGTXXXXW KEISVKQYTE
301: ILFQPLHSKK VRKFKLSSVA SVTLSA
101: NWYTEKKHKQ EVIPNPVLEV SRIAANLQSY LEQRGATLPN GIVNGRVVLP NPNCRPSYTI NLQPEVISYD QWKDIKADTK GGLSTWIKGA FHGNKSDIQD
201: SLLQNLYSIL STSPMWDRLE LRGDKNVLGE FMEFKGKHED MPLLKKLKRS KVSRFIIQKS TLFGGFGRSR VQILYSPRDY RAEGTXXXXW KEISVKQYTE
301: ILFQPLHSKK VRKFKLSSVA SVTLSA
001: MWIEIICGLV IYKLVRRFFY DDEFSDVETS DSTALFSVAH RLEKLYGGKA YVGLRIPDAD TASRQDIDVV LVTKGDVVVI SVKNLSGIVT VTSDGSWVCE
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA
Arabidopsis Description
At1g65020 [Source:UniProtKB/TrEMBL;Acc:Q5XF12]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.