CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 2
endoplasmic reticulum 4
plastid 1
extracellular 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030091_P001	Maize	extracellular, golgi	94.21	94.21
Os10t0577000-02	Rice	endoplasmic reticulum, golgi	82.93	82.93
TraesCS1D01G198400.1	Wheat	endoplasmic reticulum, golgi	80.18	80.92
TraesCS1B01G209600.1	Wheat	endoplasmic reticulum, extracellular	79.57	80.31
TraesCS1A01G194800.1	Wheat	golgi	79.57	80.31
HORVU6Hr1G058250.1	Barley	cytosol	68.6	69.02
GSMUA_Achr4P27310_001	Banana	endoplasmic reticulum, golgi	62.8	64.17
GSMUA_Achr5P03470_001	Banana	extracellular	28.05	60.93
AT1G65020.1	Thale cress	extracellular, vacuole	50.61	52.04
KRH27693	Soybean	endoplasmic reticulum, extracellular	50.61	51.55
PGSC0003DMT400008203	Potato	mitochondrion	50.0	51.41
Solyc03g097180.2.1	Tomato	extracellular	49.7	51.1
KRH77782	Soybean	endoplasmic reticulum	50.0	50.93
Bra022499.1-P	Field mustard	endoplasmic reticulum, vacuole	49.39	50.78
CDY03064	Canola	endoplasmic reticulum	11.59	50.67
Bra004108.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	49.09	50.47
VIT_16s0039g01660.t01	Wine grape	endoplasmic reticulum, extracellular	49.39	50.31

Protein Annotations

MapMan:35.2	EntrezGene:8086293	UniProt:C5WQQ0	EnsemblPlants:EER91872	ProteinID:EER91872	ProteinID:EER91872.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886
GO:GO:0016020	InterPro:IPR011528	ProteinID:KXG38828.1	InterPro:NERD	PFAM:PF08378	PFscan:PS50965
PANTHER:PTHR35287	EnsemblPlantsGene:SORBI_3001G285300	unigene:Sbi.9019	UniParc:UPI0001A823C6	RefSeq:XP_002464874.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:55861766..55866186

Molecular Weight (calculated)

37100.7 Da

IEP (calculated)

9.567

GRAVY (calculated)

-0.265

Length

328 amino acids

Sequence
(BLAST)

001: MWVEILCGLL AYKIIQRVFF AGGDDASYLA DLDSSHSDLC FAVASRLEKL YAGRCFVGLR IPDPDAGERQ HIDVVLVTKR EVMVVAIKNF SGFVEADKDG
101: NWSCPTDKKR KQEIFPNPVL EVNRLVASLQ SYLEQRGAKL PDGHIVGRVV LPNPNCRPSY TISIQPEVML YEQWKDLKTD SKSGLSAWIK GAFTGSKSDM
201: QDSVLQNLHF ILSSSPMWDR LELRGDKNVL GEFIEFKGRH EDIQLLKNLK RSKVSRFVIQ KSTLFGGFGR SRVQILYSPR DYRAEGTSSS EWKEISVKQY
301: TEIVFQPLHS KKARKFKLSS VVSVTLSA

Best Arabidopsis Sequence Match ( AT1G65020.1 )
(BLAST)

001: MWIEIICGLV IYKLVRRFFY DDEFSDVETS DSTALFSVAH RLEKLYGGKA YVGLRIPDAD TASRQDIDVV LVTKGDVVVI SVKNLSGIVT VTSDGSWVCE
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA

Arabidopsis Description

At1g65020 [Source:UniProtKB/TrEMBL;Acc:Q5XF12]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.